RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 IGLV4-3A0A075B6K6 122 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 CRLF1O75462 422 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 Q1RN00 199 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 PF4V1P10720 104 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 ID1P41134 155 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
LYSMD4-211ENST00000604213 NBASA2RRP1 2371 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 SNCGO76070 127 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 LITAFQ99732 161 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
LYSMD4-211ENST00000604213 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 TRIAP1O43715 76 aa11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 IGHG2P01859 326 aa11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 TEX49A0A1B0GTD5 131 aa11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
LYSMD4-211ENST00000604213 I3L3M4 83 aa11.27□□□□□ -0.6
LYSMD4-211ENST00000604213 LY6EQ16553 131 aa11.27□□□□□ -0.6
LYSMD4-211ENST00000604213 ODF3Q96PU9 254 aa11.27□□□□□ -0.6
LYSMD4-211ENST00000604213 BEX4Q9NWD9 120 aaPredicted RBP11.27□□□□□ -0.6
LYSMD4-211ENST00000604213 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.61
LYSMD4-211ENST00000604213 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
LYSMD4-211ENST00000604213 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 B5MCH6 92 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 K7EMT4 169 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 FOXC1Q12948 553 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
LYSMD4-211ENST00000604213 PTPRZ1P23471 2315 aaPredicted RBP11.25□□□□□ -0.61
LYSMD4-211ENST00000604213 Q6Q795 121 aa11.25□□□□□ -0.61
LYSMD4-211ENST00000604213 SPXQ9BT56 116 aa11.25□□□□□ -0.61
LYSMD4-211ENST00000604213 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
LYSMD4-211ENST00000604213 BLCAPP62952 87 aa11.25□□□□□ -0.61
LYSMD4-211ENST00000604213 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 A6NDX4 124 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 H3BMM0 161 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 UBE2WQ96B02 151 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 ICOSQ9Y6W8 199 aa11.24□□□□□ -0.61
LYSMD4-211ENST00000604213 H7C423 109 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 IFITM1P13164 125 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 H3BUX3 64 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 PRSS2P07478 247 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 SPANXCQ9NY87 97 aa11.23□□□□□ -0.61
LYSMD4-211ENST00000604213 CD28P10747 220 aa11.22□□□□□ -0.61
LYSMD4-211ENST00000604213 ABCA2Q9BZC7 2435 aa11.22□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE7O76087 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 GAGE4Q13068 117 aa11.21□□□□□ -0.61
LYSMD4-211ENST00000604213 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 CCDC179H3BU77 68 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 CFHR3Q02985 330 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 KLRB1Q12918 225 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 CELSR1Q9NYQ6 3014 aa11.21□□□□□ -0.62
LYSMD4-211ENST00000604213 MIAQ16674 131 aa11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 NDUFA12Q9UI09 145 aa11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 PIEZO1Q92508 2521 aa11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 COL6A6A6NMZ7 2263 aa11.2□□□□□ -0.62
LYSMD4-211ENST00000604213 H3BT86 120 aa11.19□□□□□ -0.62
LYSMD4-211ENST00000604213 Q6ZSV7 163 aa11.19□□□□□ -0.62
LYSMD4-211ENST00000604213 SPTAN1Q13813 2472 aaKnown RBP11.19□□□□□ -0.62
LYSMD4-211ENST00000604213 PRRC2AP48634 2157 aaKnown RBP11.19□□□□□ -0.62
LYSMD4-211ENST00000604213 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 K7EQG2 157 aa11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 COX6CP09669 75 aa11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 EDA2RQ9HAV5 297 aa11.18□□□□□ -0.62
LYSMD4-211ENST00000604213 A8MZ25 164 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 ATRXP46100 2492 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 TINCRA0A1B0GVN0 87 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 LST1O00453 97 aa11.17□□□□□ -0.62
LYSMD4-211ENST00000604213 PROK1P58294 105 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms