RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 TRAPPC2P0DI81 140 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 TRAPPC2BP0DI82 140 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 COPZ1P61923 177 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 RPL38P63173 70 aaKnown RBP1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 KLRD1Q13241 179 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 CDK5R1Q15078 307 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 C1orf137Q5JT78 98 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 SCIMPQ6UWF3 145 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 GLIPR1L1Q6UWM5 242 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 DEFB107AQ8IZN7 70 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 TMEM254Q8TBM7 123 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 NAT14Q8WUY8 206 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 LCN9Q8WX39 176 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 S100ZQ8WXG8 99 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 ARL11Q969Q4 196 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 PRELID3AQ96N28 172 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 REG4Q9BYZ8 158 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 DPY30Q9C005 99 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 CYSTM1Q9H1C7 97 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 MED9Q9NWA0 146 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 ZFC3H1O60293 1989 aaKnown RBP1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 APC2O95996 2303 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 KNTC1P50748 2209 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 WDFY4Q6ZS81 3184 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 PCNX2A6NKB5 2137 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 CFAP54Q96N23 3096 aa1.64□□□□□ -2.15
AC004542.1-201ENST00000602955 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 MYOFQ9NZM1 2061 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 LAMA1P25391 3075 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 ASCC3Q8N3C0 2202 aaKnown RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 IGF2RP11717 2491 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 FREM2Q5SZK8 3169 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 SPAARA0A1B0GVQ0 90 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 E7EUB6 86 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 J3QR89 54 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 IGLV1-51P01701 117 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 LINC00032P0C843 101 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 S100A3P33764 101 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 AKR1D1P51857 326 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 DSCR4P56555 118 aaPredicted RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 SNRPD3P62318 126 aaKnown RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 SELENOWP63302 87 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 C8orf59Q8N0T1 100 aaPredicted RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 Q8N814 137 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 MORN4Q8NDC4 146 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 PLPP5Q8NEB5 264 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 DIRC1Q969H9 104 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 CCDC167Q9P0B6 97 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 COMMD3Q9UBI1 195 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 GNG8Q9UK08 70 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 EPG5Q9HCE0 2579 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 CHD8Q9HCK8 2581 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 HEATR5BQ9P2D3 2071 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 ACACBO00763 2458 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 ASXL3Q9C0F0 2248 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 PTPRBP23467 1997 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 TANC2Q9HCD6 1990 aa1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 ANKHD1Q8IWZ3 2542 aaKnown RBP1.63□□□□□ -2.15
AC004542.1-201ENST00000602955 DNAH14Q0VDD8 3507 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 ACACAQ13085 2346 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 PKD1L2Q7Z442 2459 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 PNMA8CA0A1B0GUJ8 204 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 TCRBV4S1A1TA0A5B7 111 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 ZNF670-ZNF695F2Z2N8 137 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 H0YGG7 62 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 HMGN4O00479 90 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 HYPMO75409 117 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 PIPP12273 146 aaPredicted RBP1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 SMIM11AP58511 58 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 C1orf134Q5TEV5 83 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 RPS27LQ71UM5 84 aaKnown RBP1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 ACBD7Q8N6N7 88 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 OR4S1Q8NGB4 309 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 OR5A2Q8NGI9 324 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 OR5D14Q8NGL3 314 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 C4orf3Q8WVX3 66 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 SDF2Q99470 211 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 RERGLQ9H628 205 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 CHCHD2Q9Y6H1 151 aaPredicted RBP1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 POLEQ07864 2286 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 SPTBN4Q9H254 2564 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 DOPEY1Q5JWR5 2465 aa1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 TPRP12270 2363 aaKnown RBP1.62□□□□□ -2.15
AC004542.1-201ENST00000602955 DMXL1Q9Y485 3027 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 CFAP46Q8IYW2 2715 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 PTPRQQ9UMZ3 2332 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 CCDC88CQ9P219 2028 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 LRRK2Q5S007 2527 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 SPTBN2O15020 2390 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 A0A087WSZ3 146 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 C9orf170A2RU37 121 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 KLF7O75840 302 aaPredicted RBP1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 HBDP02042 147 aa1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 HMGN2P05204 90 aaKnown RBP1.61□□□□□ -2.15
AC004542.1-201ENST00000602955 CD14P08571 375 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms