RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 M0QY20 66 aa11.68□□□□□ -0.54
IRF3-230ENST00000601809 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
IRF3-230ENST00000601809 DAZ4Q86SG3 579 aaKnown RBP11.68□□□□□ -0.54
IRF3-230ENST00000601809 DAZ3Q9NR90 486 aaKnown RBP11.68□□□□□ -0.54
IRF3-230ENST00000601809 PCLOQ9Y6V0 5065 aa11.67□□□□□ -0.54
IRF3-230ENST00000601809 NTF3P20783 257 aa11.67□□□□□ -0.54
IRF3-230ENST00000601809 EIF5A2Q9GZV4 153 aaKnown RBP11.67□□□□□ -0.54
IRF3-230ENST00000601809 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
IRF3-230ENST00000601809 CDK2AP2O75956 126 aa11.66□□□□□ -0.54
IRF3-230ENST00000601809 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
IRF3-230ENST00000601809 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
IRF3-230ENST00000601809 C9JQL5 133 aa11.65□□□□□ -0.54
IRF3-230ENST00000601809 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
IRF3-230ENST00000601809 FUSP35637 526 aaKnown RBP eCLIP11.65□□□□□ -0.54
IRF3-230ENST00000601809 FOXA3P55318 350 aaPredicted RBP11.65□□□□□ -0.54
IRF3-230ENST00000601809 SUMO4Q6EEV6 95 aa11.65□□□□□ -0.54
IRF3-230ENST00000601809 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
IRF3-230ENST00000601809 Q9HAA7 133 aa11.65□□□□□ -0.54
IRF3-230ENST00000601809 ABCA13Q86UQ4 5058 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 F5H697 171 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 CT83Q5H943 113 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
IRF3-230ENST00000601809 GATCO43716 136 aaKnown RBP11.63□□□□□ -0.55
IRF3-230ENST00000601809 CEBPGP53567 150 aa11.63□□□□□ -0.55
IRF3-230ENST00000601809 SRSF3P84103 164 aaKnown RBP11.63□□□□□ -0.55
IRF3-230ENST00000601809 CDPF1Q6NVV7 123 aa11.63□□□□□ -0.55
IRF3-230ENST00000601809 MAPKAPK5-AS1Q8N8E1 139 aa11.63□□□□□ -0.55
IRF3-230ENST00000601809 DNAJC30Q96LL9 226 aa11.63□□□□□ -0.55
IRF3-230ENST00000601809 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
IRF3-230ENST00000601809 MGPP08493 103 aa11.62□□□□□ -0.55
IRF3-230ENST00000601809 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
IRF3-230ENST00000601809 EREGO14944 169 aa11.61□□□□□ -0.55
IRF3-230ENST00000601809 WFDC2Q14508 124 aa11.61□□□□□ -0.55
IRF3-230ENST00000601809 ATRAIDQ6UW56 229 aa11.61□□□□□ -0.55
IRF3-230ENST00000601809 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
IRF3-230ENST00000601809 TRAV8-3A0A0A6YYJ7 113 aa11.6□□□□□ -0.55
IRF3-230ENST00000601809 A8MWL6 223 aa11.6□□□□□ -0.55
IRF3-230ENST00000601809 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
IRF3-230ENST00000601809 H7C1H1 209 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 TWIST1Q15672 202 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 MPV17L2Q567V2 206 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 TMEM97Q5BJF2 176 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 GATD1Q8NB37 220 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 KRTAP4-5Q9BYR2 181 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 KLK12Q9UKR0 248 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 V9GYV3 84 aa11.59□□□□□ -0.55
IRF3-230ENST00000601809 Q8N814 137 aa11.58□□□□□ -0.56
IRF3-230ENST00000601809 TSKUQ8WUA8 353 aa11.58□□□□□ -0.56
IRF3-230ENST00000601809 ISOC2Q96AB3 205 aa11.58□□□□□ -0.56
IRF3-230ENST00000601809 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
IRF3-230ENST00000601809 GFRA4Q9GZZ7 299 aa11.58□□□□□ -0.56
IRF3-230ENST00000601809 A0A087WX48 190 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 FAM231BA6NCW3 169 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 PSCAO43653 123 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
IRF3-230ENST00000601809 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 ENHOQ6UWT2 76 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 FAT1Q14517 4588 aa11.57□□□□□ -0.56
IRF3-230ENST00000601809 FRZBQ92765 325 aa11.56□□□□□ -0.56
IRF3-230ENST00000601809 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
IRF3-230ENST00000601809 HIGD1CA8MV81 97 aa11.55□□□□□ -0.56
IRF3-230ENST00000601809 ELOBQ15370 118 aa11.55□□□□□ -0.56
IRF3-230ENST00000601809 TMEM241Q24JQ0 296 aa11.55□□□□□ -0.56
IRF3-230ENST00000601809 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
IRF3-230ENST00000601809 XGP55808 180 aa11.54□□□□□ -0.56
IRF3-230ENST00000601809 Q8N976 141 aa11.54□□□□□ -0.56
IRF3-230ENST00000601809 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.54□□□□□ -0.56
IRF3-230ENST00000601809 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
IRF3-230ENST00000601809 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
IRF3-230ENST00000601809 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
IRF3-230ENST00000601809 TRBV25-1A0A075B6N4 114 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 IGHV1-24A0A0C4DH33 117 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 TMEM262E9PQX1 116 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 PKIAP61925 76 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 RBX1P62877 108 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 PEA15Q15121 130 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
IRF3-230ENST00000601809 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 COX11Q9Y6N1 276 aa11.53□□□□□ -0.56
IRF3-230ENST00000601809 A0A1B0GUT8 65 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 GAS8-AS1O95177 125 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 Q0VG73 95 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 GAGE6Q13070 117 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 RNF185Q96GF1 192 aa11.52□□□□□ -0.57
IRF3-230ENST00000601809 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
IRF3-230ENST00000601809 GCSHP23434 173 aa11.51□□□□□ -0.57
IRF3-230ENST00000601809 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
IRF3-230ENST00000601809 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
IRF3-230ENST00000601809 RMI2Q96E14 147 aa11.51□□□□□ -0.57
IRF3-230ENST00000601809 TMEM191AQ9H0A3 160 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms