RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 A0A087WWC5 75 aa10.57□□□□□ -0.72
RPS28-203ENST00000600659 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
RPS28-203ENST00000600659 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
RPS28-203ENST00000600659 F5H697 171 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 MGPP08493 103 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 ERVFC1-1P60608 527 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 RAB14P61106 215 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
RPS28-203ENST00000600659 NFE4Q86UQ8 179 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 NIT1Q86X76 327 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 ISOC2Q96AB3 205 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 V9GYV3 84 aa10.56□□□□□ -0.72
RPS28-203ENST00000600659 PEA15Q15121 130 aa10.55□□□□□ -0.72
RPS28-203ENST00000600659 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
RPS28-203ENST00000600659 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 A8MWL6 223 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 LAGE3Q14657 143 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 FAM74A3Q4VXF1 159 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
RPS28-203ENST00000600659 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
RPS28-203ENST00000600659 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
RPS28-203ENST00000600659 TWIST1Q15672 202 aa10.53□□□□□ -0.72
RPS28-203ENST00000600659 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
RPS28-203ENST00000600659 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
RPS28-203ENST00000600659 A0A087WTM6 91 aa10.52□□□□□ -0.73
RPS28-203ENST00000600659 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
RPS28-203ENST00000600659 GFRA4Q9GZZ7 299 aa10.52□□□□□ -0.73
RPS28-203ENST00000600659 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
RPS28-203ENST00000600659 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 LRCOL1A6NCL2 159 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 FAM231BA6NCW3 169 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 IFITM2Q01629 132 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 RASL11AQ6T310 242 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 Q9HAA7 133 aa10.51□□□□□ -0.73
RPS28-203ENST00000600659 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
RPS28-203ENST00000600659 H7C1H1 209 aa10.5□□□□□ -0.73
RPS28-203ENST00000600659 ADIRFQ15847 76 aa10.5□□□□□ -0.73
RPS28-203ENST00000600659 CHCHD7Q9BUK0 85 aa10.5□□□□□ -0.73
RPS28-203ENST00000600659 C16orf90A8MZG2 172 aa10.49□□□□□ -0.73
RPS28-203ENST00000600659 FUSP35637 526 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPS28-203ENST00000600659 NIT2Q9NQR4 276 aa10.49□□□□□ -0.73
RPS28-203ENST00000600659 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
RPS28-203ENST00000600659 IQCJQ1A5X6 159 aa10.48□□□□□ -0.73
RPS28-203ENST00000600659 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
RPS28-203ENST00000600659 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 WFDC2Q14508 124 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 CLLU1Q5K131 121 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 MAPKAPK5-AS1Q8N8E1 139 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 C15orf54Q8N8G6 183 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
RPS28-203ENST00000600659 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
RPS28-203ENST00000600659 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
RPS28-203ENST00000600659 KLK12Q9UKR0 248 aa10.46□□□□□ -0.73
RPS28-203ENST00000600659 A0A087WX48 190 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 SMIM27A0A1W2PRY6 76 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 Q8N976 141 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 FRZBQ92765 325 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 TMEM191AQ9H0A3 160 aa10.45□□□□□ -0.74
RPS28-203ENST00000600659 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
RPS28-203ENST00000600659 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
RPS28-203ENST00000600659 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
RPS28-203ENST00000600659 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
RPS28-203ENST00000600659 IGHV1-24A0A0C4DH33 117 aa10.43□□□□□ -0.74
RPS28-203ENST00000600659 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
RPS28-203ENST00000600659 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
RPS28-203ENST00000600659 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
RPS28-203ENST00000600659 NAT8BQ9UHF3 227 aa10.43□□□□□ -0.74
RPS28-203ENST00000600659 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 PSCAO43653 123 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 RAB4AP20338 218 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
RPS28-203ENST00000600659 RBX1P62877 108 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 GAGE6Q13070 117 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 BORCS7Q96B45 105 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 FAT1Q14517 4588 aa10.42□□□□□ -0.74
RPS28-203ENST00000600659 Q8N814 137 aa10.41□□□□□ -0.74
RPS28-203ENST00000600659 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
RPS28-203ENST00000600659 PRR34Q9NV39 138 aa10.41□□□□□ -0.74
RPS28-203ENST00000600659 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
RPS28-203ENST00000600659 EREGO14944 169 aa10.4□□□□□ -0.74
RPS28-203ENST00000600659 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
RPS28-203ENST00000600659 RIGQ13278 110 aa10.4□□□□□ -0.74
RPS28-203ENST00000600659 ELOBQ15370 118 aa10.4□□□□□ -0.74
RPS28-203ENST00000600659 KCNIP4Q6PIL6 250 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms