RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 TRAV8-6A0A0B4J262 113 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 XKRY2A2RUG3 117 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 LRCOL1A6NCL2 159 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 SPANXN1Q5VSR9 72 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 NIT1Q86X76 327 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 CHCHD7Q9BUK0 85 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
SSBP4-208ENST00000600628 FAM231BA6NCW3 169 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 NTF3P20783 257 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
SSBP4-208ENST00000600628 SRSF3P84103 164 aaKnown RBP5.87□□□□□ -1.47
SSBP4-208ENST00000600628 OR10J3Q5JRS4 329 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 NTM-AS1Q6ZSK4 140 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
SSBP4-208ENST00000600628 SMIM7Q9BQ49 75 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 EIF5A2Q9GZV4 153 aaKnown RBP5.87□□□□□ -1.47
SSBP4-208ENST00000600628 OSTCQ9NRP0 149 aa5.87□□□□□ -1.47
SSBP4-208ENST00000600628 A0A087WTM6 91 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 CDK2AP2O75956 126 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 FAM74A3Q4VXF1 159 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 ATRAIDQ6UW56 229 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 GFRA4Q9GZZ7 299 aa5.86□□□□□ -1.47
SSBP4-208ENST00000600628 ZNF727A8MUV8 499 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 A8MWL6 223 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 EREGO14944 169 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 TRGC1P0CF51 173 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 ERVFC1-1P60608 527 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 ZNF56Q15929 161 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 DAZ4Q86SG3 579 aaKnown RBP5.85□□□□□ -1.47
SSBP4-208ENST00000600628 TSKUQ8WUA8 353 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 FRZBQ92765 325 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 ISOC2Q96AB3 205 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 DNAJC30Q96LL9 226 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 DPH3P1Q9H4G8 78 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 DAZ3Q9NR90 486 aaKnown RBP5.85□□□□□ -1.47
SSBP4-208ENST00000600628 PGPEP1Q9NXJ5 209 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
SSBP4-208ENST00000600628 V9GYV3 84 aa5.85□□□□□ -1.47
SSBP4-208ENST00000600628 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 GATCO43716 136 aaKnown RBP5.84□□□□□ -1.47
SSBP4-208ENST00000600628 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 IGHV3-33P01772 117 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 IGHV3-30-3P0DP02 117 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 RPL23P62829 140 aaKnown RBP5.84□□□□□ -1.47
SSBP4-208ENST00000600628 IQCJQ1A5X6 159 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 CDPF1Q6NVV7 123 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 SVBPQ8N300 66 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 MAPKAPK5-AS1Q8N8E1 139 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 PGLYRP4Q96LB8 373 aa5.84□□□□□ -1.47
SSBP4-208ENST00000600628 TMEM218A2RU14 115 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 H7C1H1 209 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 APOC3P02656 99 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 SMIM17P0DL12 118 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 TMEM241Q24JQ0 296 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 TMEM97Q5BJF2 176 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 RASL11AQ6T310 242 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 GATD1Q8NB37 220 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 TPPP3Q9BW30 176 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 NIT2Q9NQR4 276 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 PRR34Q9NV39 138 aa5.83□□□□□ -1.48
SSBP4-208ENST00000600628 TRAV8-3A0A0A6YYJ7 113 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 HIGD1CA8MV81 97 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 F5H697 171 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 SNAPINO95295 136 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.482e-6■□□□□ 11
SSBP4-208ENST00000600628 SSTP61278 116 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 PEA15Q15121 130 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 SEC11CQ9BY50 192 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 NAT8Q9UHE5 227 aa5.82□□□□□ -1.48
SSBP4-208ENST00000600628 CARHSP1Q9Y2V2 147 aaKnown RBP5.82□□□□□ -1.48
SSBP4-208ENST00000600628 TRBV6-5A0A0K0K1A5 114 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 A0A1B0GUV1 79 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 SMIM27A0A1W2PRY6 76 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 F8W036 122 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 PSCAO43653 123 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 CEBPGP53567 150 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 WFDC2Q14508 124 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 TWIST1Q15672 202 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 MPV17L2Q567V2 206 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 C10orf91Q5T1B1 145 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 KRTAP26-1Q6PEX3 210 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 ENHOQ6UWT2 76 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 NUP35Q8NFH5 326 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 RNF185Q96GF1 192 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 TMEM191AQ9H0A3 160 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 Q9HAA7 133 aa5.81□□□□□ -1.48
SSBP4-208ENST00000600628 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
SSBP4-208ENST00000600628 SCO1O75880 301 aa5.8□□□□□ -1.48
SSBP4-208ENST00000600628 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
SSBP4-208ENST00000600628 MGPP08493 103 aa5.8□□□□□ -1.48
SSBP4-208ENST00000600628 PKIAP61925 76 aa5.8□□□□□ -1.48
SSBP4-208ENST00000600628 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.8□□□□□ -1.48
SSBP4-208ENST00000600628 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
SSBP4-208ENST00000600628 TM2D2Q9BX73 214 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms