RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 S100A6P06703 90 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 OR10J3Q5JRS4 329 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 SAPCD1Q5SSQ6 148 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 RASL11AQ6T310 242 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 PRNTQ86SH4 94 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 FRZBQ92765 325 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 RS1O15537 224 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 P01737 135 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 MT-ND6P03923 174 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
HIF3A-217ENST00000600236 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 WDR73Q6P4I2 378 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 ZC2HC1AQ96GY0 325 aa7.73□□□□□ -1.17
HIF3A-217ENST00000600236 ABCA13Q86UQ4 5058 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 A8MWL6 223 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 GCSHP23434 173 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 S100A4P26447 101 aaKnown RBP7.72□□□□□ -1.17
HIF3A-217ENST00000600236 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
HIF3A-217ENST00000600236 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 ATP5L2Q7Z4Y8 100 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 PTH2Q96A98 100 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 C9orf85Q96MD7 179 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
HIF3A-217ENST00000600236 IGHV3-73A0A0B4J1V6 119 aa7.71□□□□□ -1.18
HIF3A-217ENST00000600236 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
HIF3A-217ENST00000600236 ZNF80P51504 273 aaPredicted RBP7.71□□□□□ -1.18
HIF3A-217ENST00000600236 LELP1Q5T871 98 aa7.71□□□□□ -1.18
HIF3A-217ENST00000600236 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
HIF3A-217ENST00000600236 NTN5Q8WTR8 489 aaPredicted RBP7.71□□□□□ -1.18
HIF3A-217ENST00000600236 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
HIF3A-217ENST00000600236 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
HIF3A-217ENST00000600236 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 A8MWV9 139 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 HLA-DQA1P01909 254 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 ASIPP42127 132 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 CRIP1P50238 77 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
HIF3A-217ENST00000600236 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 NUP35Q8NFH5 326 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
HIF3A-217ENST00000600236 DNAH5Q8TE73 4624 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 FABP5P3A8MUU1 101 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 HIGD1CA8MV81 97 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 IGHV3-30-3P0DP02 117 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 RNASE3P12724 160 aaKnown RBP7.69□□□□□ -1.18
HIF3A-217ENST00000600236 XGP55808 180 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 NDUFA6P56556 154 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 KRTAP10-1P60331 282 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 LAGE3Q14657 143 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 FAM162BQ5T6X4 162 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 ZFP2Q6ZN57 461 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 TM2D2Q9BX73 214 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 Q9HAA7 133 aa7.69□□□□□ -1.18
HIF3A-217ENST00000600236 APOBP04114 4563 aaKnown RBP7.68□□□□□ -1.18
HIF3A-217ENST00000600236 SH2D1AO60880 128 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 S100A8P05109 93 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 INAFM2P0DMQ5 153 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 RPS20P60866 119 aaKnown RBP7.68□□□□□ -1.18
HIF3A-217ENST00000600236 Q5VSD8 79 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 GATD1Q8NB37 220 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 GTSF1Q8WW33 167 aa7.68□□□□□ -1.18
HIF3A-217ENST00000600236 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
HIF3A-217ENST00000600236 IGKV3D-20A0A0C4DH25 116 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 A0A1B0GW15 77 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 XKRY2A2RUG3 117 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 RHODO00212 210 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 MRPL54Q6P161 138 aaKnown RBP7.67□□□□□ -1.18
HIF3A-217ENST00000600236 HIST3H2BBQ8N257 126 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 Q8N814 137 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
HIF3A-217ENST00000600236 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 LRCOL1A6NCL2 159 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 IFITM10A6NMD0 228 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 HBBP68871 147 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 GAGE1Q13065 139 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 GAGE4Q13068 117 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 GAGE5Q13069 117 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 LINC01559Q495D7 138 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 GAGE13Q4V321 117 aa7.66□□□□□ -1.18
HIF3A-217ENST00000600236 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
HIF3A-217ENST00000600236 H3BVH4 76 aa7.65□□□□□ -1.18
HIF3A-217ENST00000600236 CTRLP40313 264 aa7.65□□□□□ -1.18
HIF3A-217ENST00000600236 Q0VG73 95 aa7.65□□□□□ -1.18
HIF3A-217ENST00000600236 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms