RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 SRP19P09132 144 aaKnown RBP6.48□□□□□ -1.37
VRK3-215ENST00000599138 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 NTF3P20783 257 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 DAZ4Q86SG3 579 aaKnown RBP6.48□□□□□ -1.37
VRK3-215ENST00000599138 GTSF1Q8WW33 167 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 CHCHD7Q9BUK0 85 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 EIF5A2Q9GZV4 153 aaKnown RBP6.48□□□□□ -1.37
VRK3-215ENST00000599138 DAZ3Q9NR90 486 aaKnown RBP6.48□□□□□ -1.37
VRK3-215ENST00000599138 PGPEP1Q9NXJ5 209 aa6.48□□□□□ -1.37
VRK3-215ENST00000599138 TRBV6-8A0A0A6YYG3 113 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 TRGC1P0CF51 173 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 TEX261Q6UWH6 196 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 Q9HAA7 133 aa6.47□□□□□ -1.37
VRK3-215ENST00000599138 TRAV8-3A0A0A6YYJ7 113 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 H7C1H1 209 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 FOXA3P55318 350 aaPredicted RBP6.46□□□□□ -1.38
VRK3-215ENST00000599138 CT83Q5H943 113 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 NTM-AS1Q6ZSK4 140 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 DPH3P1Q9H4G8 78 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
VRK3-215ENST00000599138 ZNF727A8MUV8 499 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 A8MWL6 223 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 C9JQL5 133 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 PSCAO43653 123 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 GATCO43716 136 aaKnown RBP6.45□□□□□ -1.38
VRK3-215ENST00000599138 MGPP08493 103 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 CEBPGP53567 150 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 TM2D2Q9BX73 214 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 URGCP-MRPS24S4R325 110 aa6.45□□□□□ -1.38
VRK3-215ENST00000599138 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 A0A087WX48 190 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 FUSP35637 526 aaKnown RBP eCLIP6.44□□□□□ -1.38
VRK3-215ENST00000599138 TWIST1Q15672 202 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 IQCJQ1A5X6 159 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 FAM74A3Q4VXF1 159 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 RASL11AQ6T310 242 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 ATRAIDQ6UW56 229 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 MAPKAPK5-AS1Q8N8E1 139 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.44□□□□□ -1.38
VRK3-215ENST00000599138 OSTCQ9NRP0 149 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
VRK3-215ENST00000599138 FAM231BA6NCW3 169 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
VRK3-215ENST00000599138 WFDC2Q14508 124 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 ELOBQ15370 118 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 Q8N814 137 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 NTN5Q8WTR8 489 aaPredicted RBP6.43□□□□□ -1.38
VRK3-215ENST00000599138 TSKUQ8WUA8 353 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 FRZBQ92765 325 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 GFRA4Q9GZZ7 299 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 SMDT1Q9H4I9 107 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 NIT2Q9NQR4 276 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
VRK3-215ENST00000599138 TRBV25-1A0A075B6N4 114 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 TMEM262E9PQX1 116 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 KRTAP10-1P60331 282 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 PKIAP61925 76 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 PEA15Q15121 130 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 TMEM241Q24JQ0 296 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 KCNIP4Q6PIL6 250 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 GATD1Q8NB37 220 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 ISOC2Q96AB3 205 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 RMI2Q96E14 147 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 PGLYRP4Q96LB8 373 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 CHCHD5Q9BSY4 110 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 V9GYV3 84 aa6.42□□□□□ -1.38
VRK3-215ENST00000599138 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 HIGD1CA8MV81 97 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 RPL23P62829 140 aaKnown RBP6.41□□□□□ -1.38
VRK3-215ENST00000599138 Q0VG73 95 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 FAT1Q14517 4588 aa6.41□□□□□ -1.38
VRK3-215ENST00000599138 TRAV26-2A0A0B4J265 109 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 A0A1B0GUT8 65 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 GCSHP23434 173 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 RBX1P62877 108 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 SMIM15Q7Z3B0 74 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 Q8N976 141 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 PRR34Q9NV39 138 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 NAT8Q9UHE5 227 aa6.4□□□□□ -1.38
VRK3-215ENST00000599138 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
VRK3-215ENST00000599138 XGP55808 180 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 GAGE6Q13070 117 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 Q8N1X5 172 aa6.39□□□□□ -1.39
VRK3-215ENST00000599138 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms