RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 ATP5L2Q7Z4Y8 100 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 SVBPQ8N300 66 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 NEXN-AS1Q8NBZ9 246 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 ATP6V0E2Q8NHE4 81 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 ZNRF2Q8NHG8 242 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 FRZBQ92765 325 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 GTSF1LQ9H1H1 148 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 MRPS16Q9Y3D3 137 aaKnown RBP5.76□□□□□ -1.49
VRK3-211ENST00000596445 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 SNAPINO95295 136 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 RAB4AP20338 218 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 CAMPP49913 170 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 UBE2D3P61077 147 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 UBE2D2P62837 147 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 MRPL54Q6P161 138 aaKnown RBP5.75□□□□□ -1.49
VRK3-211ENST00000596445 KCNIP4Q6PIL6 250 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 BTF3L4Q96K17 158 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 DNAJC30Q96LL9 226 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 RPS10P5Q9NQ39 176 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 NIT2Q9NQR4 276 aa5.75□□□□□ -1.49
VRK3-211ENST00000596445 TRAV9-1A0A075B6T8 112 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 FAM104BQ5XKR9 115 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 AMN1Q8IY45 258 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.74□□□□□ -1.49
VRK3-211ENST00000596445 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 Q9H8V8 135 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 RYR2Q92736 4967 aa5.74□□□□□ -1.49
VRK3-211ENST00000596445 S100PP25815 95 aa5.73□□□□□ -1.49
VRK3-211ENST00000596445 LELP1Q5T871 98 aa5.73□□□□□ -1.49
VRK3-211ENST00000596445 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
VRK3-211ENST00000596445 MRAP2Q96G30 205 aa5.73□□□□□ -1.49
VRK3-211ENST00000596445 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
VRK3-211ENST00000596445 RYR3Q15413 4870 aa5.73□□□□□ -1.49
VRK3-211ENST00000596445 TRAV8-6A0A0B4J262 113 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 SIVA1O15304 175 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 MRPL51Q4U2R6 128 aaKnown RBP5.72□□□□□ -1.49
VRK3-211ENST00000596445 TMEM97Q5BJF2 176 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 OR10J3Q5JRS4 329 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
VRK3-211ENST00000596445 URGCP-MRPS24S4R325 110 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
VRK3-211ENST00000596445 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 TRBV6-5A0A0K0K1A5 114 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 GAS8-AS1O95177 125 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 PPP1R17O96001 155 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.5
VRK3-211ENST00000596445 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 NBDYA0A0U1RRE5 68 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 SMKR1H3BMG3 65 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 K7EP13 123 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 M0R2N4 97 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 NCR2O95944 276 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 PPBPP02775 128 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 DNAH10OSP0CZ25 163 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 CKS2P33552 79 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 RPS10P46783 165 aaKnown RBP5.7□□□□□ -1.5
VRK3-211ENST00000596445 TTC32Q5I0X7 151 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 Q6ZR54 194 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 NRACQ8N912 160 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
VRK3-211ENST00000596445 TRBV24-1A0A075B6N3 115 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 TRAV9-2A0A087WT02 112 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 D6R8Y8 96 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 COTL1Q14019 142 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 IQCJQ1A5X6 159 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 LINC01556Q5JQF7 62 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 ATRAIDQ6UW56 229 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 TMEM136Q6ZRR5 245 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 TMEM70Q9BUB7 260 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 GNB1LQ9BYB4 327 aa5.69□□□□□ -1.5
VRK3-211ENST00000596445 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 IGHV1-24A0A0C4DH33 117 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 I3L3M4 83 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 PHOX2AO14813 284 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 PMCHP20382 165 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
VRK3-211ENST00000596445 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
VRK3-211ENST00000596445 ELOBQ15370 118 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 COX19Q49B96 90 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 NIT1Q86X76 327 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 C20orf78Q9BR46 151 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 KRTAP1-5Q9BYS1 174 aa5.68□□□□□ -1.5
VRK3-211ENST00000596445 TGIF2-C20orf24A0A0A6YYL0 155 aa5.67□□□□□ -1.5
VRK3-211ENST00000596445 VCYO14598 125 aa5.67□□□□□ -1.5
VRK3-211ENST00000596445 APCSP02743 223 aa5.67□□□□□ -1.5
VRK3-211ENST00000596445 PKIAP61925 76 aa5.67□□□□□ -1.5
VRK3-211ENST00000596445 RPL32P62910 135 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms