RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 F2Z2F3 143 aa14.86□□□□□ -0.03
GTF2F1-204ENST00000594965 RPP21Q9H633 154 aaKnown RBP14.85□□□□□ -0.03
GTF2F1-204ENST00000594965 TRBV6-8A0A0A6YYG3 113 aa14.84□□□□□ -0.03
GTF2F1-204ENST00000594965 M0QY20 66 aa14.84□□□□□ -0.03
GTF2F1-204ENST00000594965 CTRLP40313 264 aa14.84□□□□□ -0.03
GTF2F1-204ENST00000594965 TOR2AQ5JU69 321 aa14.84□□□□□ -0.03
GTF2F1-204ENST00000594965 DNAJC30Q96LL9 226 aa14.84□□□□□ -0.03
GTF2F1-204ENST00000594965 TRAV8-3A0A0A6YYJ7 113 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 MGPP08493 103 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 NTF3P20783 257 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 KRTAP10-1P60331 282 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 SUMO4Q6EEV6 95 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 NTM-AS1Q6ZSK4 140 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 MAPKAPK5-AS1Q8N8E1 139 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 URGCP-MRPS24S4R325 110 aa14.83□□□□□ -0.04
GTF2F1-204ENST00000594965 WFDC2Q14508 124 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 WDR73Q6P4I2 378 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 CHCHD7Q9BUK0 85 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 TM2D2Q9BX73 214 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 CNFNQ9BYD5 112 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 KLK12Q9UKR0 248 aa14.82□□□□□ -0.04
GTF2F1-204ENST00000594965 Q8N814 137 aa14.81□□□□□ -0.04
GTF2F1-204ENST00000594965 GTSF1Q8WW33 167 aa14.81□□□□□ -0.04
GTF2F1-204ENST00000594965 NDUFS6O75380 124 aaKnown RBP14.8□□□□□ -0.04
GTF2F1-204ENST00000594965 TRGC1P0CF51 173 aa14.8□□□□□ -0.04
GTF2F1-204ENST00000594965 CEBPGP53567 150 aa14.8□□□□□ -0.04
GTF2F1-204ENST00000594965 FAM231DQ6ZW35 169 aa14.8□□□□□ -0.04
GTF2F1-204ENST00000594965 EIF5A2Q9GZV4 153 aaKnown RBP14.8□□□□□ -0.04
GTF2F1-204ENST00000594965 PCLOQ9Y6V0 5065 aa14.79□□□□□ -0.04
GTF2F1-204ENST00000594965 A0A087WX48 190 aa14.79□□□□□ -0.04
GTF2F1-204ENST00000594965 DPH3P1Q9H4G8 78 aa14.79□□□□□ -0.04
GTF2F1-204ENST00000594965 SRP19P09132 144 aaKnown RBP14.78□□□□□ -0.04
GTF2F1-204ENST00000594965 MPV17L2Q567V2 206 aa14.78□□□□□ -0.04
GTF2F1-204ENST00000594965 TMEM262E9PQX1 116 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 H7C1H1 209 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 GATCO43716 136 aaKnown RBP14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 GCSHP23434 173 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 XGP55808 180 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 TWIST1Q15672 202 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 Q8N1X5 172 aa14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 NTN5Q8WTR8 489 aaPredicted RBP14.77□□□□□ -0.05
GTF2F1-204ENST00000594965 IGLV5-52A0A0A0MRZ9 124 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 ELOBQ15370 118 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 TMEM97Q5BJF2 176 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 KCNIP4Q6PIL6 250 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 UBE2WQ96B02 151 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 SMIM7Q9BQ49 75 aa14.76□□□□□ -0.05
GTF2F1-204ENST00000594965 RASL11AQ6T310 242 aa14.75□□□□□ -0.05
GTF2F1-204ENST00000594965 ATRAIDQ6UW56 229 aa14.75□□□□□ -0.05
GTF2F1-204ENST00000594965 LINC01551Q86U37 167 aa14.75□□□□□ -0.05
GTF2F1-204ENST00000594965 CHCHD5Q9BSY4 110 aa14.75□□□□□ -0.05
GTF2F1-204ENST00000594965 IGKV2D-24A0A075B6R9 120 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 LECT2O14960 151 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 ENHOQ6UWT2 76 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 BAALCQ8WXS3 180 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 RMI2Q96E14 147 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 COX11Q9Y6N1 276 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 ABCA13Q86UQ4 5058 aa14.74□□□□□ -0.05
GTF2F1-204ENST00000594965 ZNF727A8MUV8 499 aa14.73□□□□□ -0.05
GTF2F1-204ENST00000594965 IQCJQ1A5X6 159 aa14.73□□□□□ -0.05
GTF2F1-204ENST00000594965 C15orf54Q8N8G6 183 aa14.73□□□□□ -0.05
GTF2F1-204ENST00000594965 Q8N976 141 aa14.73□□□□□ -0.05
GTF2F1-204ENST00000594965 NIT2Q9NQR4 276 aa14.73□□□□□ -0.05
GTF2F1-204ENST00000594965 TRBV25-1A0A075B6N4 114 aa14.72□□□□□ -0.05
GTF2F1-204ENST00000594965 A8MWL6 223 aa14.72□□□□□ -0.05
GTF2F1-204ENST00000594965 FOXA3P55318 350 aaPredicted RBP14.72□□□□□ -0.05
GTF2F1-204ENST00000594965 CT83Q5H943 113 aa14.72□□□□□ -0.05
GTF2F1-204ENST00000594965 Q0VG73 95 aa14.71□□□□□ -0.05
GTF2F1-204ENST00000594965 GAGE6Q13070 117 aa14.71□□□□□ -0.05
GTF2F1-204ENST00000594965 TEX261Q6UWH6 196 aa14.71□□□□□ -0.05
GTF2F1-204ENST00000594965 GATD1Q8NB37 220 aa14.71□□□□□ -0.05
GTF2F1-204ENST00000594965 PGLYRP4Q96LB8 373 aa14.71□□□□□ -0.05
GTF2F1-204ENST00000594965 C9JQL5 133 aa14.7□□□□□ -0.06
GTF2F1-204ENST00000594965 PKIAP61925 76 aa14.7□□□□□ -0.06
GTF2F1-204ENST00000594965 DNAH8Q96JB1 4490 aa14.7□□□□□ -0.06
GTF2F1-204ENST00000594965 TRAV26-2A0A0B4J265 109 aa14.69□□□□□ -0.06
GTF2F1-204ENST00000594965 IGHV1-24A0A0C4DH33 117 aa14.69□□□□□ -0.06
GTF2F1-204ENST00000594965 ANGP03950 147 aaKnown RBP14.69□□□□□ -0.06
GTF2F1-204ENST00000594965 RBX1P62877 108 aa14.69□□□□□ -0.06
GTF2F1-204ENST00000594965 OSTCQ9NRP0 149 aa14.69□□□□□ -0.06
GTF2F1-204ENST00000594965 SRSF3P84103 164 aaKnown RBP14.68□□□□□ -0.06
GTF2F1-204ENST00000594965 DEFB104AQ8WTQ1 72 aa14.68□□□□□ -0.06
GTF2F1-204ENST00000594965 TSKUQ8WUA8 353 aa14.67□□□□□ -0.06
GTF2F1-204ENST00000594965 FRZBQ92765 325 aa14.67□□□□□ -0.06
GTF2F1-204ENST00000594965 PRR34Q9NV39 138 aa14.67□□□□□ -0.06
GTF2F1-204ENST00000594965 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.66□□□□□ -0.06
GTF2F1-204ENST00000594965 CRPP02741 224 aa14.66□□□□□ -0.06
GTF2F1-204ENST00000594965 RPL39LQ96EH5 51 aaKnown RBP14.66□□□□□ -0.06
GTF2F1-204ENST00000594965 C1orf43Q9BWL3 253 aa14.66□□□□□ -0.06
GTF2F1-204ENST00000594965 ISOC2Q96AB3 205 aa14.65□□□□□ -0.06
GTF2F1-204ENST00000594965 GFRA4Q9GZZ7 299 aa14.65□□□□□ -0.06
GTF2F1-204ENST00000594965 FAM30AQ9NZY2 134 aa14.65□□□□□ -0.06
GTF2F1-204ENST00000594965 V9GYV3 84 aa14.65□□□□□ -0.06
GTF2F1-204ENST00000594965 HIGD1CA8MV81 97 aa14.64□□□□□ -0.07
GTF2F1-204ENST00000594965 RPL23P62829 140 aaKnown RBP14.64□□□□□ -0.07
GTF2F1-204ENST00000594965 MIAQ16674 131 aa14.64□□□□□ -0.07
GTF2F1-204ENST00000594965 TMEM241Q24JQ0 296 aa14.64□□□□□ -0.07
GTF2F1-204ENST00000594965 CLPSL2Q6UWE3 100 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms