RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 TRAV9-2A0A087WT02 112 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 PRSS29PA6NIE9 313 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 K7EP13 123 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 EVI2AP22794 236 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 CLLU1Q5K131 121 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 FRAS1Q86XX4 4008 aa12.68□□□□□ -0.38
TCF3-216ENST00000592395 A0A087WWC5 75 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 MGPP08493 103 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 FOXA3P55318 350 aaPredicted RBP12.67□□□□□ -0.38
TCF3-216ENST00000592395 TWIST1Q15672 202 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 ADIRFQ15847 76 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 TSKUQ8WUA8 353 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 DPH3P1Q9H4G8 78 aa12.67□□□□□ -0.38
TCF3-216ENST00000592395 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
TCF3-216ENST00000592395 UBE2D3P61077 147 aa12.66□□□□□ -0.38
TCF3-216ENST00000592395 UBE2D2P62837 147 aa12.66□□□□□ -0.38
TCF3-216ENST00000592395 IFITM2Q01629 132 aa12.66□□□□□ -0.38
TCF3-216ENST00000592395 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
TCF3-216ENST00000592395 H7C1H1 209 aa12.65□□□□□ -0.38
TCF3-216ENST00000592395 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
TCF3-216ENST00000592395 V9GYV3 84 aa12.65□□□□□ -0.38
TCF3-216ENST00000592395 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
TCF3-216ENST00000592395 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
TCF3-216ENST00000592395 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
TCF3-216ENST00000592395 DNAH17Q9UFH2 4485 aa12.63□□□□□ -0.39
TCF3-216ENST00000592395 HIGD1CA8MV81 97 aa12.63□□□□□ -0.39
TCF3-216ENST00000592395 M0QY20 66 aa12.63□□□□□ -0.39
TCF3-216ENST00000592395 SMIM15Q7Z3B0 74 aa12.63□□□□□ -0.39
TCF3-216ENST00000592395 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
TCF3-216ENST00000592395 DNAJC30Q96LL9 226 aa12.62□□□□□ -0.39
TCF3-216ENST00000592395 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
TCF3-216ENST00000592395 A0A1B0GVY2 172 aa12.61□□□□□ -0.39
TCF3-216ENST00000592395 A0A1B0GUT8 65 aa12.6□□□□□ -0.39
TCF3-216ENST00000592395 RASL11AQ6T310 242 aa12.6□□□□□ -0.39
TCF3-216ENST00000592395 DAZ4Q86SG3 579 aaKnown RBP12.6□□□□□ -0.39
TCF3-216ENST00000592395 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
TCF3-216ENST00000592395 DAZ3Q9NR90 486 aaKnown RBP12.6□□□□□ -0.39
TCF3-216ENST00000592395 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
TCF3-216ENST00000592395 IGHV3-30P01768 117 aa12.59□□□□□ -0.39
TCF3-216ENST00000592395 IGHV3-33P01772 117 aa12.59□□□□□ -0.39
TCF3-216ENST00000592395 IGHV3-30-3P0DP02 117 aa12.59□□□□□ -0.39
TCF3-216ENST00000592395 IGHV3-30-5P0DP03 117 aa12.59□□□□□ -0.39
TCF3-216ENST00000592395 TMEM97Q5BJF2 176 aa12.58□□□□□ -0.4
TCF3-216ENST00000592395 Q6ZRN7 208 aaPredicted RBP12.58□□□□□ -0.4
TCF3-216ENST00000592395 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
TCF3-216ENST00000592395 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
TCF3-216ENST00000592395 NAT8BQ9UHF3 227 aa12.58□□□□□ -0.4
TCF3-216ENST00000592395 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
TCF3-216ENST00000592395 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
TCF3-216ENST00000592395 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
TCF3-216ENST00000592395 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
TCF3-216ENST00000592395 RIGQ13278 110 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 NIT1Q86X76 327 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 FRZBQ92765 325 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 URGCP-MRPS24S4R325 110 aa12.56□□□□□ -0.4
TCF3-216ENST00000592395 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
TCF3-216ENST00000592395 Q8N3U1 123 aa12.55□□□□□ -0.4
TCF3-216ENST00000592395 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
TCF3-216ENST00000592395 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
TCF3-216ENST00000592395 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
TCF3-216ENST00000592395 LAGE3Q14657 143 aa12.54□□□□□ -0.4
TCF3-216ENST00000592395 HECTD4Q9Y4D8 3996 aa12.54□□□□□ -0.4
TCF3-216ENST00000592395 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
TCF3-216ENST00000592395 PPP1R2P9O14990 202 aa12.53□□□□□ -0.4
TCF3-216ENST00000592395 KCNIP4Q6PIL6 250 aa12.53□□□□□ -0.4
TCF3-216ENST00000592395 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
TCF3-216ENST00000592395 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
TCF3-216ENST00000592395 A0A087WX48 190 aa12.52□□□□□ -0.41
TCF3-216ENST00000592395 PKIAP61925 76 aa12.52□□□□□ -0.41
TCF3-216ENST00000592395 IQCJQ1A5X6 159 aa12.51□□□□□ -0.41
TCF3-216ENST00000592395 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
TCF3-216ENST00000592395 Q9HAA7 133 aa12.51□□□□□ -0.41
TCF3-216ENST00000592395 PKD1P98161 4303 aa12.5□□□□□ -0.41
TCF3-216ENST00000592395 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
TCF3-216ENST00000592395 A0A1B0GW15 77 aa12.5□□□□□ -0.41
TCF3-216ENST00000592395 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
TCF3-216ENST00000592395 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
TCF3-216ENST00000592395 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
TCF3-216ENST00000592395 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 RAB4AP20338 218 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 ELOBQ15370 118 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 COMMD7Q86VX2 200 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 AMN1Q8IY45 258 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
TCF3-216ENST00000592395 PSCAO43653 123 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 S100A8P05109 93 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 ADCYAP1P18509 176 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 COTL1Q14019 142 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 MPV17L2Q567V2 206 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
TCF3-216ENST00000592395 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.41
TCF3-216ENST00000592395 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
TCF3-216ENST00000592395 F8W036 122 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms