RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
CLIP3-205ENST00000592017 NTF3P20783 257 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 TWIST1Q15672 202 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 Q8N3U1 123 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 KRTAP4-5Q9BYR2 181 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 Q9HAA7 133 aa9.4□□□□□ -0.9
CLIP3-205ENST00000592017 C9JQL5 133 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
CLIP3-205ENST00000592017 PEA15Q15121 130 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 OR10G8Q8NGN5 311 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 DPH3P1Q9H4G8 78 aa9.39□□□□□ -0.91
CLIP3-205ENST00000592017 A8MWL6 223 aa9.38□□□□□ -0.91
CLIP3-205ENST00000592017 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.38□□□□□ -0.91
CLIP3-205ENST00000592017 PGLYRP4Q96LB8 373 aa9.38□□□□□ -0.91
CLIP3-205ENST00000592017 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
CLIP3-205ENST00000592017 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 H7C1H1 209 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 ADIRFQ15847 76 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 TMEM241Q24JQ0 296 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
CLIP3-205ENST00000592017 M0QY20 66 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 PSCAO43653 123 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 CT83Q5H943 113 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 DAZ4Q86SG3 579 aaKnown RBP9.36□□□□□ -0.91
CLIP3-205ENST00000592017 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
CLIP3-205ENST00000592017 DAZ3Q9NR90 486 aaKnown RBP9.36□□□□□ -0.91
CLIP3-205ENST00000592017 A0A087WX48 190 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 EREGO14944 169 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLIP3-205ENST00000592017 RAB14P61106 215 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 RPL23P62829 140 aaKnown RBP9.35□□□□□ -0.91
CLIP3-205ENST00000592017 NIT1Q86X76 327 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 ISOC2Q96AB3 205 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
CLIP3-205ENST00000592017 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 HIGD1CA8MV81 97 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 RASL11AQ6T310 242 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
CLIP3-205ENST00000592017 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
CLIP3-205ENST00000592017 LAGE3Q14657 143 aa9.33□□□□□ -0.92
CLIP3-205ENST00000592017 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
CLIP3-205ENST00000592017 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
CLIP3-205ENST00000592017 FAT1Q14517 4588 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 A0A087WTM6 91 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 DEFB104AQ8WTQ1 72 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 GFRA4Q9GZZ7 299 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 V9GYV3 84 aa9.32□□□□□ -0.92
CLIP3-205ENST00000592017 TRBV25-1A0A075B6N4 114 aa9.31□□□□□ -0.92
CLIP3-205ENST00000592017 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
CLIP3-205ENST00000592017 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
CLIP3-205ENST00000592017 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
CLIP3-205ENST00000592017 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
CLIP3-205ENST00000592017 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 A0A1B0GUT8 65 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 GAGE6Q13070 117 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 GATD1Q8NB37 220 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
CLIP3-205ENST00000592017 IGHV1-24A0A0C4DH33 117 aa9.29□□□□□ -0.92
CLIP3-205ENST00000592017 FAM231BA6NCW3 169 aa9.29□□□□□ -0.92
CLIP3-205ENST00000592017 ELOBQ15370 118 aa9.29□□□□□ -0.92
CLIP3-205ENST00000592017 NUP35Q8NFH5 326 aa9.29□□□□□ -0.92
CLIP3-205ENST00000592017 RPL39LQ96EH5 51 aaKnown RBP9.29□□□□□ -0.92
CLIP3-205ENST00000592017 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 CRPP02741 224 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 ANGP03950 147 aaKnown RBP9.28□□□□□ -0.92
CLIP3-205ENST00000592017 PKIAP61925 76 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 RIGQ13278 110 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 Q8N976 141 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 RMI2Q96E14 147 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
CLIP3-205ENST00000592017 COTL1Q14019 142 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 CLLU1Q5K131 121 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 ATRAIDQ6UW56 229 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 Q8N1X5 172 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
CLIP3-205ENST00000592017 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 LECT2O14960 151 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 AMTP48728 403 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 KRTAP10-1P60331 282 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 RBX1P62877 108 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 CLPSL2Q6UWE3 100 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms