RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 Q9HAA7 133 aa11.01□□□□□ -0.65
CIRBP-233ENST00000591622 MGPP08493 103 aa11□□□□□ -0.65
CIRBP-233ENST00000591622 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
CIRBP-233ENST00000591622 NIT1Q86X76 327 aa11□□□□□ -0.65
CIRBP-233ENST00000591622 SREK1IP1Q8N9Q2 155 aaPredicted RBP11□□□□□ -0.65
CIRBP-233ENST00000591622 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
CIRBP-233ENST00000591622 URGCP-MRPS24S4R325 110 aa11□□□□□ -0.65
CIRBP-233ENST00000591622 TRBV6-8A0A0A6YYG3 113 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 ZNF727A8MUV8 499 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 H7C1H1 209 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 M0QY20 66 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 PSCAO43653 123 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
CIRBP-233ENST00000591622 LINC01551Q86U37 167 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
CIRBP-233ENST00000591622 TWIST1Q15672 202 aa10.98□□□□□ -0.65
CIRBP-233ENST00000591622 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
CIRBP-233ENST00000591622 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CIRBP-233ENST00000591622 A8MWL6 223 aa10.97□□□□□ -0.65
CIRBP-233ENST00000591622 CT83Q5H943 113 aa10.97□□□□□ -0.65
CIRBP-233ENST00000591622 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
CIRBP-233ENST00000591622 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
CIRBP-233ENST00000591622 PCLOQ9Y6V0 5065 aa10.96□□□□□ -0.65
CIRBP-233ENST00000591622 A0A087WX48 190 aa10.96□□□□□ -0.65
CIRBP-233ENST00000591622 TRAV8-3A0A0A6YYJ7 113 aa10.96□□□□□ -0.65
CIRBP-233ENST00000591622 TMEM97Q5BJF2 176 aa10.96□□□□□ -0.65
CIRBP-233ENST00000591622 TM2D2Q9BX73 214 aa10.96□□□□□ -0.65
CIRBP-233ENST00000591622 RYR1P21817 5038 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 LRCOL1A6NCL2 159 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 FAM74A3Q4VXF1 159 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 KCNIP4Q6PIL6 250 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
CIRBP-233ENST00000591622 C9JQL5 133 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 CDK2AP2O75956 126 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 FOXA3P55318 350 aaPredicted RBP10.94□□□□□ -0.66
CIRBP-233ENST00000591622 ELOBQ15370 118 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 NIT2Q9NQR4 276 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 KLK12Q9UKR0 248 aa10.94□□□□□ -0.66
CIRBP-233ENST00000591622 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
CIRBP-233ENST00000591622 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
CIRBP-233ENST00000591622 PEA15Q15121 130 aa10.93□□□□□ -0.66
CIRBP-233ENST00000591622 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
CIRBP-233ENST00000591622 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
CIRBP-233ENST00000591622 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
CIRBP-233ENST00000591622 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
CIRBP-233ENST00000591622 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
CIRBP-233ENST00000591622 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
CIRBP-233ENST00000591622 LRP1BQ9NZR2 4599 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 FAM231BA6NCW3 169 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 PKIAP61925 76 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 FRZBQ92765 325 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 UBE2WQ96B02 151 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 RMI2Q96E14 147 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 COX11Q9Y6N1 276 aa10.91□□□□□ -0.66
CIRBP-233ENST00000591622 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
CIRBP-233ENST00000591622 IQCJQ1A5X6 159 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 MPV17L2Q567V2 206 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 GATD1Q8NB37 220 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 V9GYV3 84 aa10.9□□□□□ -0.66
CIRBP-233ENST00000591622 TRAV26-2A0A0B4J265 109 aa10.89□□□□□ -0.67
CIRBP-233ENST00000591622 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
CIRBP-233ENST00000591622 Q8N814 137 aa10.89□□□□□ -0.67
CIRBP-233ENST00000591622 IGKV2D-24A0A075B6R9 120 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 A0A1B0GUT8 65 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 Q0VG73 95 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 GAGE6Q13070 117 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 ADIRFQ15847 76 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 ATRAIDQ6UW56 229 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 Q8N976 141 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 DNAH5Q8TE73 4624 aa10.88□□□□□ -0.67
CIRBP-233ENST00000591622 ANGP03950 147 aaKnown RBP10.87□□□□□ -0.67
CIRBP-233ENST00000591622 ENHOQ6UWT2 76 aa10.87□□□□□ -0.67
CIRBP-233ENST00000591622 NTN5Q8WTR8 489 aaPredicted RBP10.87□□□□□ -0.67
CIRBP-233ENST00000591622 IGLV5-52A0A0A0MRZ9 124 aa10.86□□□□□ -0.67
CIRBP-233ENST00000591622 CRPP02741 224 aa10.86□□□□□ -0.67
CIRBP-233ENST00000591622 RBX1P62877 108 aa10.86□□□□□ -0.67
CIRBP-233ENST00000591622 WFDC2Q14508 124 aa10.86□□□□□ -0.67
CIRBP-233ENST00000591622 LECT2O14960 151 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 GCSHP23434 173 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 RAB14P61106 215 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 COTL1Q14019 142 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 NUP35Q8NFH5 326 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 DEFB104AQ8WTQ1 72 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 BAALCQ8WXS3 180 aa10.85□□□□□ -0.67
CIRBP-233ENST00000591622 RPL39LQ96EH5 51 aaKnown RBP10.85□□□□□ -0.67
CIRBP-233ENST00000591622 TMEM243Q9BU79 118 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms