RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 USF3Q68DE3 2245 aa-1.11□□□□□ -2.59
PDCD5-206ENST00000588622 ZMYM4Q5VZL5 1548 aa-1.11□□□□□ -2.59
PDCD5-206ENST00000588622 TRAV1-2A0A0B4J238 106 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 TNFSF15O95150 251 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 FABP1P07148 127 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 SCTP09683 121 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 LINC01545Q5VT33 79 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 NDUFA12Q9UI09 145 aa-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 IBTKQ9P2D0 1353 aaPredicted RBP-1.12□□□□□ -2.59
PDCD5-206ENST00000588622 PBRM1Q86U86 1689 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 TRAV22A0A0B4J277 110 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 A0A1B0GX51 115 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 PIN1P1O15428 100 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 Q8IZM0 81 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 TCTE3Q8IZS6 198 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 SKA2Q8WVK7 121 aaPredicted RBP-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 MAGOHBQ96A72 148 aaKnown RBP-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 DDA1Q9BW61 102 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 V9GYQ6 96 aa-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 MAP1AP78559 2803 aaPredicted RBP-1.13□□□□□ -2.59
PDCD5-206ENST00000588622 Q5VV11 94 aa-1.14□□□□□ -2.59
PDCD5-206ENST00000588622 HIGD1AQ9Y241 93 aa-1.14□□□□□ -2.59
PDCD5-206ENST00000588622 EP300Q09472 2414 aaPredicted RBP-1.14□□□□□ -2.59
PDCD5-206ENST00000588622 ERCC6Q03468 1493 aa-1.14□□□□□ -2.59
PDCD5-206ENST00000588622 LRP1BQ9NZR2 4599 aa-1.15□□□□□ -2.59
PDCD5-206ENST00000588622 PARP14Q460N5 1801 aa-1.15□□□□□ -2.59
PDCD5-206ENST00000588622 ARFGEF1Q9Y6D6 1849 aa-1.15□□□□□ -2.59
PDCD5-206ENST00000588622 CLPSL1A2RUU4 121 aa-1.15□□□□□ -2.59
PDCD5-206ENST00000588622 CMPK1P30085 196 aa-1.15□□□□□ -2.59
PDCD5-206ENST00000588622 KMT2CQ8NEZ4 4911 aaKnown RBP-1.16□□□□□ -2.59
PDCD5-206ENST00000588622 CHD8Q9HCK8 2581 aa-1.16□□□□□ -2.59
PDCD5-206ENST00000588622 SPRR2BP35325 72 aa-1.16□□□□□ -2.6
PDCD5-206ENST00000588622 NBEAL1Q6ZS30 2694 aa-1.16□□□□□ -2.6
PDCD5-206ENST00000588622 SIPA1L3O60292 1781 aaPredicted RBP-1.16□□□□□ -2.6
PDCD5-206ENST00000588622 FLNBO75369 2602 aaKnown RBP-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 ATRQ13535 2644 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 STAB2Q8WWQ8 2551 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 HERC1Q15751 4861 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 TRBV20-1A0A075B6N2 111 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 C10orf82Q8WW14 230 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 MUC22E2RYF6 1773 aaPredicted RBP-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 NF1P21359 2839 aa-1.17□□□□□ -2.6
PDCD5-206ENST00000588622 SETXQ7Z333 2677 aaKnown RBP-1.18□□□□□ -2.6
PDCD5-206ENST00000588622 TSTD3H0UI37 97 aa-1.18□□□□□ -2.6
PDCD5-206ENST00000588622 UBE2D1P51668 147 aa-1.18□□□□□ -2.6
PDCD5-206ENST00000588622 GINS2Q9Y248 185 aa-1.18□□□□□ -2.6
PDCD5-206ENST00000588622 C9orf116Q5BN46 136 aaPredicted RBP-1.19□□□□□ -2.6
PDCD5-206ENST00000588622 SPANXN1Q5VSR9 72 aa-1.19□□□□□ -2.6
PDCD5-206ENST00000588622 VSTM2AQ8TAG5 236 aa-1.19□□□□□ -2.6
PDCD5-206ENST00000588622 HSPB11Q9Y547 144 aa-1.19□□□□□ -2.6
PDCD5-206ENST00000588622 SYNJ1O43426 1573 aa-1.2□□□□□ -2.6
PDCD5-206ENST00000588622 PIRTP0C851 137 aa-1.2□□□□□ -2.6
PDCD5-206ENST00000588622 RPRMQ9NS64 109 aa-1.2□□□□□ -2.6
PDCD5-206ENST00000588622 SPCS1Q9Y6A9 102 aa-1.2□□□□□ -2.6
PDCD5-206ENST00000588622 IFT172Q9UG01 1749 aa-1.2□□□□□ -2.6
PDCD5-206ENST00000588622 ZNF609O15014 1411 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 KRTAP19-8Q3LI54 63 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 CFAP126Q5VTH2 177 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 MIC13Q5XKP0 118 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 BAGE3Q86Y29 109 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 SCN3BQ9NY72 215 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 BCL9LQ86UU0 1499 aa-1.21□□□□□ -2.6
PDCD5-206ENST00000588622 BCE1O60756 84 aa-1.22□□□□□ -2.6
PDCD5-206ENST00000588622 SMIM15Q7Z3B0 74 aa-1.22□□□□□ -2.6
PDCD5-206ENST00000588622 PRKDCP78527 4128 aaKnown RBP-1.22□□□□□ -2.61
PDCD5-206ENST00000588622 MYH13Q9UKX3 1938 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 C10orf71Q711Q0 1435 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 NEBP20929 6669 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 URB1O60287 2271 aaKnown RBP-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 FAM92AA1XBS5 289 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 APOC4-APOC2K7ER74 178 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 NCS1P62166 190 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 CCDC153Q494R4 210 aa-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 RPL7L1Q6DKI1 246 aaKnown RBP-1.23□□□□□ -2.61
PDCD5-206ENST00000588622 NPFFO15130 113 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 IFNA17P01571 189 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 NBEAP1P0C6P0 100 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 UBE2G1P62253 170 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 NPVFQ9HCQ7 196 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 SAR1AQ9NR31 198 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 SPANXCQ9NY87 97 aa-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 CNOT1A5YKK6 2376 aaKnown RBP-1.24□□□□□ -2.61
PDCD5-206ENST00000588622 LAMC1P11047 1609 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 M0R129 80 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 SMIM6P0DI80 62 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 KRTAP20-2Q3LI61 65 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 MORN2Q502X0 79 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 PLXNB2O15031 1838 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 PCLOQ9Y6V0 5065 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 CREBBPQ92793 2442 aa-1.25□□□□□ -2.61
PDCD5-206ENST00000588622 FAM236AA0A1B0GUQ0 79 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 FAM236BA0A1B0GV22 79 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 A6NIN4 97 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 K7EQZ3 153 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 DBIP07108 87 aaKnown RBP-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 HAMPP81172 84 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 MYO7BQ6PIF6 2116 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 ZNF818PQ6ZRF7 136 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 WNK3Q9BYP7 1800 aa-1.26□□□□□ -2.61
PDCD5-206ENST00000588622 PITX3O75364 302 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms