RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
PDCD5-206ENST00000588622 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
PDCD5-206ENST00000588622 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
PDCD5-206ENST00000588622 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
PDCD5-206ENST00000588622 FOXD1Q16676 465 aa15.44■□□□□ 0.06
PDCD5-206ENST00000588622 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
PDCD5-206ENST00000588622 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
PDCD5-206ENST00000588622 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
PDCD5-206ENST00000588622 ADRA2BP18089 450 aa14.82□□□□□ -0.04
PDCD5-206ENST00000588622 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
PDCD5-206ENST00000588622 MSH5O43196 834 aa14.34□□□□□ -0.11
PDCD5-206ENST00000588622 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
PDCD5-206ENST00000588622 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
PDCD5-206ENST00000588622 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
PDCD5-206ENST00000588622 KCNA4P22459 653 aa13.3□□□□□ -0.28
PDCD5-206ENST00000588622 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
PDCD5-206ENST00000588622 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
PDCD5-206ENST00000588622 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
PDCD5-206ENST00000588622 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
PDCD5-206ENST00000588622 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
PDCD5-206ENST00000588622 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
PDCD5-206ENST00000588622 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
PDCD5-206ENST00000588622 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
PDCD5-206ENST00000588622 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
PDCD5-206ENST00000588622 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
PDCD5-206ENST00000588622 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
PDCD5-206ENST00000588622 ZBTB22O15209 634 aa12.31□□□□□ -0.44
PDCD5-206ENST00000588622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDCD5-206ENST00000588622 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
PDCD5-206ENST00000588622 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
PDCD5-206ENST00000588622 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
PDCD5-206ENST00000588622 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
PDCD5-206ENST00000588622 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
PDCD5-206ENST00000588622 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
PDCD5-206ENST00000588622 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
PDCD5-206ENST00000588622 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
PDCD5-206ENST00000588622 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
PDCD5-206ENST00000588622 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
PDCD5-206ENST00000588622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
PDCD5-206ENST00000588622 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
PDCD5-206ENST00000588622 CAPN15O75808 1086 aa11.71□□□□□ -0.53
PDCD5-206ENST00000588622 POTEHQ6S545 545 aa11.71□□□□□ -0.53
PDCD5-206ENST00000588622 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
PDCD5-206ENST00000588622 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
PDCD5-206ENST00000588622 APLP2Q06481 763 aa11.64□□□□□ -0.55
PDCD5-206ENST00000588622 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
PDCD5-206ENST00000588622 DSG3P32926 999 aa11.58□□□□□ -0.56
PDCD5-206ENST00000588622 ABCB7O75027 752 aa11.55□□□□□ -0.56
PDCD5-206ENST00000588622 POLA2Q14181 598 aa11.47□□□□□ -0.57
PDCD5-206ENST00000588622 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
PDCD5-206ENST00000588622 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
PDCD5-206ENST00000588622 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
PDCD5-206ENST00000588622 FBLN2P98095 1184 aa11.12□□□□□ -0.63
PDCD5-206ENST00000588622 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
PDCD5-206ENST00000588622 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
PDCD5-206ENST00000588622 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
PDCD5-206ENST00000588622 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
PDCD5-206ENST00000588622 FKBP8Q14318 412 aa10.91□□□□□ -0.66
PDCD5-206ENST00000588622 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
PDCD5-206ENST00000588622 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
PDCD5-206ENST00000588622 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
PDCD5-206ENST00000588622 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
PDCD5-206ENST00000588622 PROM2Q8N271 834 aa10.8□□□□□ -0.68
PDCD5-206ENST00000588622 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDCD5-206ENST00000588622 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
PDCD5-206ENST00000588622 CHRDL2Q6WN34 429 aa10.74□□□□□ -0.69
PDCD5-206ENST00000588622 PITPNM1O00562 1244 aa10.68□□□□□ -0.7
PDCD5-206ENST00000588622 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
PDCD5-206ENST00000588622 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
PDCD5-206ENST00000588622 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
PDCD5-206ENST00000588622 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
PDCD5-206ENST00000588622 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDCD5-206ENST00000588622 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
PDCD5-206ENST00000588622 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
PDCD5-206ENST00000588622 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
PDCD5-206ENST00000588622 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
PDCD5-206ENST00000588622 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
PDCD5-206ENST00000588622 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
PDCD5-206ENST00000588622 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
PDCD5-206ENST00000588622 HAX1O00165 279 aa10.33□□□□□ -0.76
PDCD5-206ENST00000588622 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
PDCD5-206ENST00000588622 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
PDCD5-206ENST00000588622 MIER1Q8N108 512 aa10.3□□□□□ -0.76
PDCD5-206ENST00000588622 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
PDCD5-206ENST00000588622 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
PDCD5-206ENST00000588622 EVX2Q03828 476 aa10.19□□□□□ -0.78
PDCD5-206ENST00000588622 NUBP1P53384 320 aa10.15□□□□□ -0.78
PDCD5-206ENST00000588622 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
PDCD5-206ENST00000588622 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
PDCD5-206ENST00000588622 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
PDCD5-206ENST00000588622 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
PDCD5-206ENST00000588622 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
PDCD5-206ENST00000588622 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
PDCD5-206ENST00000588622 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
PDCD5-206ENST00000588622 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
PDCD5-206ENST00000588622 TSPYL2Q9H2G4 693 aaPredicted RBP10.02□□□□□ -0.81
PDCD5-206ENST00000588622 LHX8Q68G74 356 aa10□□□□□ -0.81
PDCD5-206ENST00000588622 CCDC61Q9Y6R9 512 aa9.99□□□□□ -0.81
PDCD5-206ENST00000588622 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
PDCD5-206ENST00000588622 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms