RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 LY6G6CO95867 125 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 S100PP25815 95 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 UBE2D3P61077 147 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 UBE2D2P62837 147 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 MRPL51Q4U2R6 128 aaKnown RBP7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 LGALS9CQ6DKI2 356 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 LINC00476Q8WZB0 136 aa7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 RPL39LQ96EH5 51 aaKnown RBP7.38□□□□□ -1.23
SMARCA4-213ENST00000587988 TRAV9-1A0A075B6T8 112 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 SMKR1H3BMG3 65 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 H7C1H1 209 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 S100A8P05109 93 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 CCL18P55774 89 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 RPL36AP83881 106 aaKnown RBP7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 RPL36ALQ969Q0 106 aaKnown RBP7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 NIT2Q9NQR4 276 aa7.37□□□□□ -1.23
SMARCA4-213ENST00000587988 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 TGIF2-C20orf24A0A0A6YYL0 155 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 LCE6AA0A183 80 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 NCR2O95944 276 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 ELOBQ15370 118 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 TMEM136Q6ZRR5 245 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 SH2D6Q7Z4S9 175 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 TNFRSF18Q9Y5U5 241 aa7.36□□□□□ -1.23
SMARCA4-213ENST00000587988 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
SMARCA4-213ENST00000587988 DEFB104AQ8WTQ1 72 aa7.35□□□□□ -1.23
SMARCA4-213ENST00000587988 FRZBQ92765 325 aa7.35□□□□□ -1.23
SMARCA4-213ENST00000587988 YPEL4Q96NS1 127 aa7.35□□□□□ -1.23
SMARCA4-213ENST00000587988 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
SMARCA4-213ENST00000587988 D6R8Y8 96 aa7.34□□□□□ -1.23
SMARCA4-213ENST00000587988 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
SMARCA4-213ENST00000587988 NRACQ8N912 160 aa7.34□□□□□ -1.23
SMARCA4-213ENST00000587988 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
SMARCA4-213ENST00000587988 VPS13DQ5THJ4 4388 aa7.34□□□□□ -1.24
SMARCA4-213ENST00000587988 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 TRBV6-5A0A0K0K1A5 114 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 CKS2P33552 79 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 TIRAPP58753 221 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 NTM-AS1Q6ZSK4 140 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 GNB1LQ9BYB4 327 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 SMCO4Q9NRQ5 59 aa7.33□□□□□ -1.24
SMARCA4-213ENST00000587988 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 SCO1O75880 301 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 LELP1Q5T871 98 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 DAZ4Q86SG3 579 aaKnown RBP7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 Q9H8V8 135 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 DAZ3Q9NR90 486 aaKnown RBP7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 KMT2AQ03164 3969 aa7.32□□□□□ -1.24
SMARCA4-213ENST00000587988 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 ATP6V1G1O75348 118 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 NPYP01303 97 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 POLR2KP53803 58 aaKnown RBP7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 ORMDL3Q8N138 153 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 TMEM70Q9BUB7 260 aa7.31□□□□□ -1.24
SMARCA4-213ENST00000587988 TRBV6-8A0A0A6YYG3 113 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 SIVA1O15304 175 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 APCSP02743 223 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 PPBPP02775 128 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 COX19Q49B96 90 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 PRELID3AQ96N28 172 aa7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
SMARCA4-213ENST00000587988 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 I3L3M4 83 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 M0R2N4 97 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 PPP1R17O96001 155 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 PMCHP20382 165 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 Q8N3U1 123 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
SMARCA4-213ENST00000587988 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 PHOX2AO14813 284 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 TSHBP01222 138 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 MT-ND6P03923 174 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 S100A1P23297 94 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 FABP9Q0Z7S8 132 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 COTL1Q14019 142 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
SMARCA4-213ENST00000587988 DNAH6Q9C0G6 4158 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 TRBV25-1A0A075B6N4 114 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms