RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 LYZL1Q6UWQ5 148 aa18.68■□□□□ 0.58
LIG3-208ENST00000586407 RNASE7Q9H1E1 156 aaKnown RBP18.68■□□□□ 0.58
LIG3-208ENST00000586407 TRAV8-3A0A0A6YYJ7 113 aa18.67■□□□□ 0.58
LIG3-208ENST00000586407 LECT2O14960 151 aa18.67■□□□□ 0.58
LIG3-208ENST00000586407 Q8N814 137 aa18.67■□□□□ 0.58
LIG3-208ENST00000586407 OCC1Q8TAD7 63 aa18.67■□□□□ 0.58
LIG3-208ENST00000586407 TM2D2Q9BX73 214 aa18.67■□□□□ 0.58
LIG3-208ENST00000586407 ABCA13Q86UQ4 5058 aa18.66■□□□□ 0.58
LIG3-208ENST00000586407 BIN3Q9NQY0 253 aa18.66■□□□□ 0.58
LIG3-208ENST00000586407 A0A087WX48 190 aa18.65■□□□□ 0.58
LIG3-208ENST00000586407 IGLV5-52A0A0A0MRZ9 124 aa18.65■□□□□ 0.58
LIG3-208ENST00000586407 TRBV6-8A0A0A6YYG3 113 aa18.65■□□□□ 0.58
LIG3-208ENST00000586407 CACNG7P62955 275 aa18.65■□□□□ 0.58
LIG3-208ENST00000586407 Q8N1X5 172 aa18.65■□□□□ 0.58
LIG3-208ENST00000586407 XKRY2A2RUG3 117 aa18.64■□□□□ 0.57
LIG3-208ENST00000586407 GCSHP23434 173 aa18.64■□□□□ 0.57
LIG3-208ENST00000586407 CEBPGP53567 150 aa18.64■□□□□ 0.57
LIG3-208ENST00000586407 TOR2AQ5JU69 321 aa18.64■□□□□ 0.57
LIG3-208ENST00000586407 UBE2WQ96B02 151 aa18.64■□□□□ 0.57
LIG3-208ENST00000586407 XGP55808 180 aa18.63■□□□□ 0.57
LIG3-208ENST00000586407 SUMO4Q6EEV6 95 aa18.63■□□□□ 0.57
LIG3-208ENST00000586407 LYPD6BQ8NI32 183 aa18.63■□□□□ 0.57
LIG3-208ENST00000586407 TMEM262E9PQX1 116 aa18.62■□□□□ 0.57
LIG3-208ENST00000586407 NTM-AS1Q6ZSK4 140 aa18.62■□□□□ 0.57
LIG3-208ENST00000586407 RPP21Q9H633 154 aaKnown RBP18.62■□□□□ 0.57
LIG3-208ENST00000586407 F2Z2F3 143 aa18.61■□□□□ 0.57
LIG3-208ENST00000586407 M0QY20 66 aa18.61■□□□□ 0.57
LIG3-208ENST00000586407 NTF3P20783 257 aa18.61■□□□□ 0.57
LIG3-208ENST00000586407 HAMPP81172 84 aa18.61■□□□□ 0.57
LIG3-208ENST00000586407 BAALCQ8WXS3 180 aa18.61■□□□□ 0.57
LIG3-208ENST00000586407 IGKV2D-24A0A075B6R9 120 aa18.6■□□□□ 0.57
LIG3-208ENST00000586407 CTRLP40313 264 aa18.6■□□□□ 0.57
LIG3-208ENST00000586407 MPV17L2Q567V2 206 aa18.6■□□□□ 0.57
LIG3-208ENST00000586407 KCNIP4Q6PIL6 250 aa18.6■□□□□ 0.57
LIG3-208ENST00000586407 CHCHD5Q9BSY4 110 aa18.6■□□□□ 0.57
LIG3-208ENST00000586407 TMEM250H0YL14 139 aa18.59■□□□□ 0.57
LIG3-208ENST00000586407 NTN5Q8WTR8 489 aaPredicted RBP18.59■□□□□ 0.57
LIG3-208ENST00000586407 CHCHD7Q9BUK0 85 aa18.58■□□□□ 0.56
LIG3-208ENST00000586407 TRGC1P0CF51 173 aa18.57■□□□□ 0.56
LIG3-208ENST00000586407 C15orf54Q8N8G6 183 aa18.57■□□□□ 0.56
LIG3-208ENST00000586407 Q8N976 141 aa18.57■□□□□ 0.56
LIG3-208ENST00000586407 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.57■□□□□ 0.56
LIG3-208ENST00000586407 DEFB104AQ8WTQ1 72 aa18.57■□□□□ 0.56
LIG3-208ENST00000586407 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.56■□□□□ 0.56
LIG3-208ENST00000586407 GTSF1Q8WW33 167 aa18.56■□□□□ 0.56
LIG3-208ENST00000586407 RMI2Q96E14 147 aa18.56■□□□□ 0.56
LIG3-208ENST00000586407 EIF5A2Q9GZV4 153 aaKnown RBP18.56■□□□□ 0.56
LIG3-208ENST00000586407 DPH3P1Q9H4G8 78 aa18.56■□□□□ 0.56
LIG3-208ENST00000586407 GAGE6Q13070 117 aa18.55■□□□□ 0.56
LIG3-208ENST00000586407 ELOBQ15370 118 aa18.55■□□□□ 0.56
LIG3-208ENST00000586407 TWIST1Q15672 202 aa18.55■□□□□ 0.56
LIG3-208ENST00000586407 H7C1H1 209 aa18.54■□□□□ 0.56
LIG3-208ENST00000586407 ATRAIDQ6UW56 229 aa18.54■□□□□ 0.56
LIG3-208ENST00000586407 ENHOQ6UWT2 76 aa18.54■□□□□ 0.56
LIG3-208ENST00000586407 GATCO43716 136 aaKnown RBP18.53■□□□□ 0.56
LIG3-208ENST00000586407 ANGP03950 147 aaKnown RBP18.53■□□□□ 0.56
LIG3-208ENST00000586407 RASL11AQ6T310 242 aa18.53■□□□□ 0.56
LIG3-208ENST00000586407 WDR73Q6P4I2 378 aa18.52■□□□□ 0.56
LIG3-208ENST00000586407 FAM210AQ96ND0 272 aa18.52■□□□□ 0.56
LIG3-208ENST00000586407 CNFNQ9BYD5 112 aa18.52■□□□□ 0.56
LIG3-208ENST00000586407 COX11Q9Y6N1 276 aa18.52■□□□□ 0.56
LIG3-208ENST00000586407 TMEM97Q5BJF2 176 aa18.51■□□□□ 0.55
LIG3-208ENST00000586407 CLPSL2Q6UWE3 100 aa18.51■□□□□ 0.55
LIG3-208ENST00000586407 SMIM7Q9BQ49 75 aa18.51■□□□□ 0.55
LIG3-208ENST00000586407 TRBV25-1A0A075B6N4 114 aa18.5■□□□□ 0.55
LIG3-208ENST00000586407 TRAV26-2A0A0B4J265 109 aa18.5■□□□□ 0.55
LIG3-208ENST00000586407 CRPP02741 224 aa18.5■□□□□ 0.55
LIG3-208ENST00000586407 FOXA3P55318 350 aaPredicted RBP18.5■□□□□ 0.55
LIG3-208ENST00000586407 FAM30AQ9NZY2 134 aa18.5■□□□□ 0.55
LIG3-208ENST00000586407 SRP19P09132 144 aaKnown RBP18.49■□□□□ 0.55
LIG3-208ENST00000586407 RBX1P62877 108 aa18.49■□□□□ 0.55
LIG3-208ENST00000586407 FAM231DQ6ZW35 169 aa18.49■□□□□ 0.55
LIG3-208ENST00000586407 PGLYRP4Q96LB8 373 aa18.49■□□□□ 0.55
LIG3-208ENST00000586407 IGHV1-24A0A0C4DH33 117 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 SMR3BP02814 79 aaPredicted RBP18.48■□□□□ 0.55
LIG3-208ENST00000586407 Q0VG73 95 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 IQCJQ1A5X6 159 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 LINC01620Q4KN68 170 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 C1orf43Q9BWL3 253 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 NIT2Q9NQR4 276 aa18.48■□□□□ 0.55
LIG3-208ENST00000586407 GATD1Q8NB37 220 aa18.47■□□□□ 0.55
LIG3-208ENST00000586407 EPM2AB3EWF7 344 aa18.46■□□□□ 0.55
LIG3-208ENST00000586407 LINC01551Q86U37 167 aa18.46■□□□□ 0.55
LIG3-208ENST00000586407 ZNF727A8MUV8 499 aa18.45■□□□□ 0.54
LIG3-208ENST00000586407 PKIAP61925 76 aa18.45■□□□□ 0.54
LIG3-208ENST00000586407 TMEM70Q9BUB7 260 aa18.45■□□□□ 0.54
LIG3-208ENST00000586407 A8MWL6 223 aa18.44■□□□□ 0.54
LIG3-208ENST00000586407 RPL39LQ96EH5 51 aaKnown RBP18.44■□□□□ 0.54
LIG3-208ENST00000586407 LINC00269Q8N2A0 174 aa18.43■□□□□ 0.54
LIG3-208ENST00000586407 HLA-DQA1P01909 254 aa18.42■□□□□ 0.54
LIG3-208ENST00000586407 Q5VSD8 79 aa18.42■□□□□ 0.54
LIG3-208ENST00000586407 TMEM243Q9BU79 118 aa18.42■□□□□ 0.54
LIG3-208ENST00000586407 CT83Q5H943 113 aa18.41■□□□□ 0.54
LIG3-208ENST00000586407 C9JQL5 133 aa18.4■□□□□ 0.54
LIG3-208ENST00000586407 GFRA4Q9GZZ7 299 aa18.4■□□□□ 0.54
LIG3-208ENST00000586407 PRR34Q9NV39 138 aa18.4■□□□□ 0.54
LIG3-208ENST00000586407 NDUFS6O75380 124 aaKnown RBP18.39■□□□□ 0.53
LIG3-208ENST00000586407 MIAQ16674 131 aa18.39■□□□□ 0.53
LIG3-208ENST00000586407 SMIM15Q7Z3B0 74 aa18.39■□□□□ 0.53
LIG3-208ENST00000586407 C20orf203Q8NBC4 194 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms