RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 NTN5Q8WTR8 489 aaPredicted RBP11.42□□□□□ -0.58
ITGB4-213ENST00000584939 SSTP61278 116 aa11.41□□□□□ -0.58
ITGB4-213ENST00000584939 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
ITGB4-213ENST00000584939 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
ITGB4-213ENST00000584939 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
ITGB4-213ENST00000584939 RPL36ALQ969Q0 106 aaKnown RBP11.41□□□□□ -0.58
ITGB4-213ENST00000584939 EPM2AB3EWF7 344 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 CEBPGP53567 150 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 FAM231DQ6ZW35 169 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 GTSF1Q8WW33 167 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 RPP21Q9H633 154 aaKnown RBP11.4□□□□□ -0.58
ITGB4-213ENST00000584939 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.58
ITGB4-213ENST00000584939 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 CTRLP40313 264 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 RAB4BP61018 213 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 UBE2D3P61077 147 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 UBE2D2P62837 147 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 NIT1Q86X76 327 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 CNFNQ9BYD5 112 aa11.39□□□□□ -0.59
ITGB4-213ENST00000584939 WFDC2Q14508 124 aa11.38□□□□□ -0.59
ITGB4-213ENST00000584939 ZNF56Q15929 161 aa11.38□□□□□ -0.59
ITGB4-213ENST00000584939 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
ITGB4-213ENST00000584939 XKRY2A2RUG3 117 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 F2Z2F3 143 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 CACNG7P62955 275 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 NEXN-AS1Q8NBZ9 246 aa11.37□□□□□ -0.59
ITGB4-213ENST00000584939 A0A087WX48 190 aa11.36□□□□□ -0.59
ITGB4-213ENST00000584939 NTF3P20783 257 aa11.36□□□□□ -0.59
ITGB4-213ENST00000584939 AP1S3Q96PC3 154 aa11.36□□□□□ -0.59
ITGB4-213ENST00000584939 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
ITGB4-213ENST00000584939 F5H697 171 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 LECT2O14960 151 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 GATCO43716 136 aaKnown RBP11.35□□□□□ -0.59
ITGB4-213ENST00000584939 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
ITGB4-213ENST00000584939 IFITM2Q01629 132 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 KCNIP4Q6PIL6 250 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 RMI2Q96E14 147 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
ITGB4-213ENST00000584939 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
ITGB4-213ENST00000584939 HAMPP81172 84 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 ELOBQ15370 118 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 CT83Q5H943 113 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 BAALCQ8WXS3 180 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 FRZBQ92765 325 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
ITGB4-213ENST00000584939 IGKV2D-24A0A075B6R9 120 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 M0QY20 66 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.6
ITGB4-213ENST00000584939 SMIM17P0DL12 118 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 PEA15Q15121 130 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 Q5VSD8 79 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 SMDT1Q9H4I9 107 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 OSTCQ9NRP0 149 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 V9GYV3 84 aa11.33□□□□□ -0.6
ITGB4-213ENST00000584939 TMEM241Q24JQ0 296 aa11.32□□□□□ -0.6
ITGB4-213ENST00000584939 FAM74A3Q4VXF1 159 aa11.32□□□□□ -0.6
ITGB4-213ENST00000584939 SUMO4Q6EEV6 95 aa11.32□□□□□ -0.6
ITGB4-213ENST00000584939 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.32□□□□□ -0.6
ITGB4-213ENST00000584939 A8MWL6 223 aa11.31□□□□□ -0.6
ITGB4-213ENST00000584939 INAFM2P0DMQ5 153 aa11.31□□□□□ -0.6
ITGB4-213ENST00000584939 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
ITGB4-213ENST00000584939 FAM30AQ9NZY2 134 aa11.31□□□□□ -0.6
ITGB4-213ENST00000584939 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
ITGB4-213ENST00000584939 MGPP08493 103 aa11.3□□□□□ -0.6
ITGB4-213ENST00000584939 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
ITGB4-213ENST00000584939 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
ITGB4-213ENST00000584939 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
ITGB4-213ENST00000584939 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
ITGB4-213ENST00000584939 Q0VG73 95 aa11.29□□□□□ -0.6
ITGB4-213ENST00000584939 TWIST1Q15672 202 aa11.29□□□□□ -0.6
ITGB4-213ENST00000584939 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
ITGB4-213ENST00000584939 Q8N976 141 aa11.29□□□□□ -0.6
ITGB4-213ENST00000584939 CHCHD5Q9BSY4 110 aa11.29□□□□□ -0.6
ITGB4-213ENST00000584939 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
ITGB4-213ENST00000584939 ATRAIDQ6UW56 229 aa11.28□□□□□ -0.6
ITGB4-213ENST00000584939 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
ITGB4-213ENST00000584939 GFRA4Q9GZZ7 299 aa11.28□□□□□ -0.6
ITGB4-213ENST00000584939 FAM231BA6NCW3 169 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 FAM229AH3BQW9 127 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 TMEM97Q5BJF2 176 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 CLLU1Q5K131 121 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 ENHOQ6UWT2 76 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
ITGB4-213ENST00000584939 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
ITGB4-213ENST00000584939 PKIAP61925 76 aa11.26□□□□□ -0.61
ITGB4-213ENST00000584939 ADIRFQ15847 76 aa11.26□□□□□ -0.61
ITGB4-213ENST00000584939 C1orf43Q9BWL3 253 aa11.26□□□□□ -0.61
ITGB4-213ENST00000584939 TRAV26-2A0A0B4J265 109 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms