RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 SMIM17P0DL12 118 aa13.38□□□□□ -0.27
TOP3A-219ENST00000584887 EIF5AP63241 154 aaKnown RBP13.38□□□□□ -0.27
TOP3A-219ENST00000584887 OR5AL1P0C617 328 aa13.37□□□□□ -0.27
TOP3A-219ENST00000584887 RPL35P42766 123 aaKnown RBP13.37□□□□□ -0.27
TOP3A-219ENST00000584887 ATRAIDQ6UW56 229 aa13.37□□□□□ -0.27
TOP3A-219ENST00000584887 TPPP3Q9BW30 176 aa13.37□□□□□ -0.27
TOP3A-219ENST00000584887 GNG13Q9P2W3 67 aa13.37□□□□□ -0.27
TOP3A-219ENST00000584887 MYCBP2O75592 4640 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 C14orf177Q52M58 125 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 ENHOQ6UWT2 76 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 AP1S3Q96PC3 154 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
TOP3A-219ENST00000584887 SSBP4Q9BWG4 385 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-219ENST00000584887 MGPP08493 103 aa13.35□□□□□ -0.27
TOP3A-219ENST00000584887 GZMBP10144 247 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 PKIAP61925 76 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 CCL20P78556 96 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 CHAC1Q9BUX1 264 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 MANBALQ9NQG1 85 aa13.34□□□□□ -0.27
TOP3A-219ENST00000584887 GAGE6Q13070 117 aa13.33□□□□□ -0.28
TOP3A-219ENST00000584887 CENPWQ5EE01 88 aa13.33□□□□□ -0.28
TOP3A-219ENST00000584887 DAZAP1Q96EP5 407 aaKnown RBP13.33□□□□□ -0.28
TOP3A-219ENST00000584887 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
TOP3A-219ENST00000584887 TMEM97Q5BJF2 176 aa13.32□□□□□ -0.28
TOP3A-219ENST00000584887 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
TOP3A-219ENST00000584887 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
TOP3A-219ENST00000584887 FER1L6-AS1Q8NA97 138 aa13.31□□□□□ -0.28
TOP3A-219ENST00000584887 DEFB104AQ8WTQ1 72 aa13.31□□□□□ -0.28
TOP3A-219ENST00000584887 C11orf52Q96A22 123 aa13.31□□□□□ -0.28
TOP3A-219ENST00000584887 KIF25-AS1Q9Y6Z4 181 aa13.31□□□□□ -0.28
TOP3A-219ENST00000584887 TRBV25-1A0A075B6N4 114 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 RBX1P62877 108 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 MIAQ16674 131 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 CIRBP-AS1Q8TBR5 109 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 VAX2Q9UIW0 290 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 DNAH8Q96JB1 4490 aa13.3□□□□□ -0.28
TOP3A-219ENST00000584887 RPS20P60866 119 aaKnown RBP13.29□□□□□ -0.28
TOP3A-219ENST00000584887 RAB19A4D1S5 217 aa13.28□□□□□ -0.28
TOP3A-219ENST00000584887 TEX46H3BTG2 121 aa13.28□□□□□ -0.28
TOP3A-219ENST00000584887 GNG4P50150 75 aa13.28□□□□□ -0.28
TOP3A-219ENST00000584887 LINC00269Q8N2A0 174 aa13.28□□□□□ -0.28
TOP3A-219ENST00000584887 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.29
TOP3A-219ENST00000584887 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
TOP3A-219ENST00000584887 H7C1H1 209 aa13.27□□□□□ -0.29
TOP3A-219ENST00000584887 IGLC6P0CF74 106 aa13.27□□□□□ -0.29
TOP3A-219ENST00000584887 SUMO4Q6EEV6 95 aa13.27□□□□□ -0.29
TOP3A-219ENST00000584887 M0QY20 66 aa13.26□□□□□ -0.29
TOP3A-219ENST00000584887 IGLV2-8P01709 118 aa13.26□□□□□ -0.29
TOP3A-219ENST00000584887 P01737 135 aa13.26□□□□□ -0.29
TOP3A-219ENST00000584887 RAB5CP51148 216 aa13.26□□□□□ -0.29
TOP3A-219ENST00000584887 CACNG7P62955 275 aa13.26□□□□□ -0.29
TOP3A-219ENST00000584887 EIF5AL1Q6IS14 154 aaKnown RBP13.26□□□□□ -0.29
TOP3A-219ENST00000584887 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
TOP3A-219ENST00000584887 PRSS1P07477 247 aa13.25□□□□□ -0.29
TOP3A-219ENST00000584887 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-219ENST00000584887 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 C19orf71A6NCJ1 209 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 KRTAP29-1A8MX34 341 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-219ENST00000584887 IFNA1P01562 189 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-219ENST00000584887 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 PRR34Q9NV39 138 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
TOP3A-219ENST00000584887 PDE6DO43924 150 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 TRGC1P0CF51 173 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 SULT1A2P50226 295 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 REG3AQ06141 175 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 LYZL1Q6UWQ5 148 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
TOP3A-219ENST00000584887 F2Z2F3 143 aa13.21□□□□□ -0.29
TOP3A-219ENST00000584887 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
TOP3A-219ENST00000584887 BIN3Q9NQY0 253 aa13.21□□□□□ -0.29
TOP3A-219ENST00000584887 TRBV20OR9-2A0A075B6H5 130 aa13.2□□□□□ -0.3
TOP3A-219ENST00000584887 BCL2P10415 239 aa13.2□□□□□ -0.3
TOP3A-219ENST00000584887 KRTAP10-4P60372 401 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-219ENST00000584887 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
TOP3A-219ENST00000584887 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
TOP3A-219ENST00000584887 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
TOP3A-219ENST00000584887 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
TOP3A-219ENST00000584887 UBE2L6O14933 153 aa13.18□□□□□ -0.3
TOP3A-219ENST00000584887 NTF3P20783 257 aa13.18□□□□□ -0.3
TOP3A-219ENST00000584887 C9orf163Q8N9P6 203 aa13.18□□□□□ -0.3
TOP3A-219ENST00000584887 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
TOP3A-219ENST00000584887 IGLV4-60A0A075B6I1 120 aa13.17□□□□□ -0.3
TOP3A-219ENST00000584887 hDV102S1A0JD36 115 aa13.17□□□□□ -0.3
TOP3A-219ENST00000584887 NIT2Q9NQR4 276 aa13.17□□□□□ -0.3
TOP3A-219ENST00000584887 AMTP48728 403 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 COTL1Q14019 142 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 TWIST1Q15672 202 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 GFRA4Q9GZZ7 299 aa13.16□□□□□ -0.3
TOP3A-219ENST00000584887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-219ENST00000584887 CTRLP40313 264 aa13.15□□□□□ -0.3
TOP3A-219ENST00000584887 SLC51BQ86UW2 128 aa13.15□□□□□ -0.3
TOP3A-219ENST00000584887 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
TOP3A-219ENST00000584887 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms