RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 IBTKQ9P2D0 1353 aaPredicted RBP-0.17□□□□□ -2.44
SMARCE1-219ENST00000583294 TSTD1Q8NFU3 115 aa-0.17□□□□□ -2.44
SMARCE1-219ENST00000583294 PRG4Q92954 1404 aaPredicted RBP-0.17□□□□□ -2.44
SMARCE1-219ENST00000583294 SCP2D1Q9UJQ7 156 aa-0.17□□□□□ -2.44
SMARCE1-219ENST00000583294 ABCA2Q9BZC7 2435 aa-0.17□□□□□ -2.44
SMARCE1-219ENST00000583294 IL5P05113 134 aa-0.18□□□□□ -2.44
SMARCE1-219ENST00000583294 UBE2D1P51668 147 aa-0.18□□□□□ -2.44
SMARCE1-219ENST00000583294 GOLGA3Q08378 1498 aa-0.18□□□□□ -2.44
SMARCE1-219ENST00000583294 NCR2O95944 276 aa-0.19□□□□□ -2.44
SMARCE1-219ENST00000583294 IFITM1P13164 125 aa-0.19□□□□□ -2.44
SMARCE1-219ENST00000583294 UBE2DNLQ8IWF7 75 aa-0.19□□□□□ -2.44
SMARCE1-219ENST00000583294 ADGRB1O14514 1584 aa-0.19□□□□□ -2.44
SMARCE1-219ENST00000583294 SPTBN2O15020 2390 aa-0.2□□□□□ -2.44
SMARCE1-219ENST00000583294 SPTSSBQ8NFR3 76 aa-0.2□□□□□ -2.44
SMARCE1-219ENST00000583294 TRAV1-2A0A0B4J238 106 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 CLPSL1A2RUU4 121 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 IFNA17P01571 189 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 PIPP12273 146 aaPredicted RBP-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 RRAS2P62070 204 aaPredicted RBP-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 S100A7L2Q5SY68 101 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 SSBP3-AS1Q7Z2R9 100 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 FHAD1B1AJZ9 1412 aa-0.21□□□□□ -2.44
SMARCE1-219ENST00000583294 ZNF815PA8K554 130 aa-0.22□□□□□ -2.44
SMARCE1-219ENST00000583294 NPFFO15130 113 aa-0.22□□□□□ -2.44
SMARCE1-219ENST00000583294 COPZ2Q9P299 210 aa-0.22□□□□□ -2.44
SMARCE1-219ENST00000583294 NCOR1O75376 2440 aa-0.22□□□□□ -2.44
SMARCE1-219ENST00000583294 TMEM2Q9UHN6 1383 aa-0.22□□□□□ -2.45
SMARCE1-219ENST00000583294 SIPA1L3O60292 1781 aaPredicted RBP-0.22□□□□□ -2.45
SMARCE1-219ENST00000583294 UNC13AQ9UPW8 1703 aa-0.23□□□□□ -2.45
SMARCE1-219ENST00000583294 G3V318 75 aa-0.23□□□□□ -2.45
SMARCE1-219ENST00000583294 MAFIPQ8WZ33 124 aa-0.23□□□□□ -2.45
SMARCE1-219ENST00000583294 SPTSSAQ969W0 71 aa-0.23□□□□□ -2.45
SMARCE1-219ENST00000583294 WFDC6Q9BQY6 131 aa-0.23□□□□□ -2.45
SMARCE1-219ENST00000583294 CEP152O94986 1710 aa-0.24□□□□□ -2.45
SMARCE1-219ENST00000583294 FAM92AA1XBS5 289 aa-0.24□□□□□ -2.45
SMARCE1-219ENST00000583294 SNCGO76070 127 aa-0.24□□□□□ -2.45
SMARCE1-219ENST00000583294 TPT1P8Q9HAU6 139 aa-0.24□□□□□ -2.45
SMARCE1-219ENST00000583294 APOC4-APOC2K7ER74 178 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 SMIM21Q3B7S5 101 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 SCIMPQ6UWF3 145 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 ANP32BQ92688 251 aaKnown RBP-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 DAPK1P53355 1430 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 MYH9P35579 1960 aaKnown RBP-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 PTPRQQ9UMZ3 2332 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 ZNF292O60281 2723 aa-0.25□□□□□ -2.45
SMARCE1-219ENST00000583294 ANKRD17O75179 2603 aaKnown RBP-0.26□□□□□ -2.45
SMARCE1-219ENST00000583294 FLNCQ14315 2725 aa-0.27□□□□□ -2.45
SMARCE1-219ENST00000583294 ZMYM4Q5VZL5 1548 aa-0.27□□□□□ -2.45
SMARCE1-219ENST00000583294 AKAP6Q13023 2319 aa-0.27□□□□□ -2.45
SMARCE1-219ENST00000583294 CBLN1P23435 193 aa-0.27□□□□□ -2.45
SMARCE1-219ENST00000583294 FAM208BQ5VWN6 2430 aa-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 NDUFB6O95139 128 aa-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 CFDP00746 253 aaPredicted RBP-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 COPZ1P61923 177 aa-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 RPS25P62851 125 aaKnown RBP-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 ZNF818PQ6ZRF7 136 aa-0.28□□□□□ -2.45
SMARCE1-219ENST00000583294 IFT172Q9UG01 1749 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 TRBV10-3A0A0K0K1G6 114 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 SMIM6P0DI80 62 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 ALX1Q15699 326 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 KCNRGQ8N5I3 272 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 LINC00312Q9Y6C7 94 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 CACNA1AO00555 2505 aa-0.29□□□□□ -2.46
SMARCE1-219ENST00000583294 LOC105371267A0A1B0GV96 52 aa-0.3□□□□□ -2.46
SMARCE1-219ENST00000583294 C10orf142B7Z368 130 aa-0.3□□□□□ -2.46
SMARCE1-219ENST00000583294 GUCA1AP43080 201 aaPredicted RBP-0.3□□□□□ -2.46
SMARCE1-219ENST00000583294 SPEF2Q9C093 1822 aa-0.3□□□□□ -2.46
SMARCE1-219ENST00000583294 HMCN2Q8NDA2 5059 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 BAGE3Q86Y29 109 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 SEC11CQ9BY50 192 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 PRO0255Q9UI72 69 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 C2CD3Q4AC94 2353 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 DOPEY2Q9Y3R5 2298 aa-0.31□□□□□ -2.46
SMARCE1-219ENST00000583294 DSTQ03001 7570 aaKnown RBP-0.32□□□□□ -2.46
SMARCE1-219ENST00000583294 CYP4F30PQ9H0H9 118 aa-0.32□□□□□ -2.46
SMARCE1-219ENST00000583294 SDF2Q99470 211 aa-0.33□□□□□ -2.46
SMARCE1-219ENST00000583294 MYH8P13535 1937 aa-0.33□□□□□ -2.46
SMARCE1-219ENST00000583294 PLCE1Q9P212 2302 aa-0.33□□□□□ -2.46
SMARCE1-219ENST00000583294 NSD1Q96L73 2696 aaPredicted RBP-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 A0A0D9SFI3 127 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 SPINK8P0C7L1 97 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 KRTAP6-1Q3LI64 71 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 CFAP126Q5VTH2 177 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 CASKIN1Q8WXD9 1431 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 TCEAL4Q96EI5 215 aa-0.34□□□□□ -2.46
SMARCE1-219ENST00000583294 LRRC37A3O60309 1634 aa-0.35□□□□□ -2.46
SMARCE1-219ENST00000583294 CSMD3Q7Z407 3707 aa-0.35□□□□□ -2.46
SMARCE1-219ENST00000583294 PIN1P1O15428 100 aa-0.35□□□□□ -2.47
SMARCE1-219ENST00000583294 CCL8P80075 99 aa-0.35□□□□□ -2.47
SMARCE1-219ENST00000583294 Q5VV11 94 aa-0.35□□□□□ -2.47
SMARCE1-219ENST00000583294 NPVFQ9HCQ7 196 aa-0.35□□□□□ -2.47
SMARCE1-219ENST00000583294 NWD2Q9ULI1 1742 aa-0.35□□□□□ -2.47
SMARCE1-219ENST00000583294 PTPN13Q12923 2485 aa-0.36□□□□□ -2.47
SMARCE1-219ENST00000583294 PKDREJQ9NTG1 2253 aa-0.36□□□□□ -2.47
SMARCE1-219ENST00000583294 SMCO1Q147U7 214 aa-0.36□□□□□ -2.47
SMARCE1-219ENST00000583294 CNFNQ9BYD5 112 aa-0.36□□□□□ -2.47
SMARCE1-219ENST00000583294 TMEM191AQ9H0A3 160 aa-0.36□□□□□ -2.47
SMARCE1-219ENST00000583294 BIVM-ERCC5R4GMW8 1640 aa-0.37□□□□□ -2.47
SMARCE1-219ENST00000583294 ZNF518AQ6AHZ1 1483 aa-0.37□□□□□ -2.47
SMARCE1-219ENST00000583294 PFDN5Q99471 154 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms