RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 INAFM1C9JVW0 142 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 BVES-AS1Q5T3Y7 98 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 SPTBN4Q9H254 2564 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 NOP10Q9NPE3 64 aaKnown RBP7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 ICOSQ9Y6W8 199 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 ATRXP46100 2492 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 GAGE7O76087 117 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 SCGB1C2P0DMR2 95 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 CEND1Q8N111 149 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 RMI2Q96E14 147 aa7.41□□□□□ -1.22
TRAPPC8-211ENST00000582539 PAX4O43316 350 aa7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 GATA1P15976 413 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 C9orf118A6NHY6 69 aa7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 DKK2Q9UBU2 259 aa7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 TP73-AS1Q9UF72 201 aa7.4□□□□□ -1.22
TRAPPC8-211ENST00000582539 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.23
TRAPPC8-211ENST00000582539 RNASE8Q8TDE3 154 aaKnown RBP7.39□□□□□ -1.23
TRAPPC8-211ENST00000582539 MEIG1Q5JSS6 88 aa7.39□□□□□ -1.23
TRAPPC8-211ENST00000582539 TSHBP01222 138 aa7.39□□□□□ -1.23
TRAPPC8-211ENST00000582539 MPV17L2Q567V2 206 aa7.39□□□□□ -1.23
TRAPPC8-211ENST00000582539 NAV2Q8IVL1 2488 aa7.39□□□□□ -1.23
TRAPPC8-211ENST00000582539 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 PSMB2P49721 201 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 GAGE4Q13068 117 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 GAGE5Q13069 117 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 MKI67P46013 3256 aaKnown RBP7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 IGIPA6NJ69 53 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 SPRY2O43597 315 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 WFDC9Q8NEX5 89 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 CRPP02741 224 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 UBE2V1Q13404 147 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 RNF183Q96D59 192 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 TM2D2Q9BX73 214 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 PPDPFQ9H3Y8 114 aa7.38□□□□□ -1.23
TRAPPC8-211ENST00000582539 IGHV1-58A0A0C4DH39 117 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 RBMY1BA6NDE4 496 aaKnown RBP7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 RBMY1EA6NEQ0 496 aaKnown RBP7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 RBMY1DP0C7P1 496 aaKnown RBP7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 RBMY1A1P0DJD3 496 aaKnown RBP7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 RBMY1CP0DJD4 496 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 F8WDY8 70 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 H3BQ85 93 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 LINC00315P59091 139 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 LINC00173Q6ZV60 143 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 STPG4Q8N801 248 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 CITED1Q99966 193 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 HHLA3Q9XRX5 114 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 PCNTO95613 3336 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 A0A1B0GV90 55 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 UBE2D3P61077 147 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 UBE2D2P62837 147 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
TRAPPC8-211ENST00000582539 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 ZNF479Q96JC4 524 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 C1orf158Q8N1D5 194 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 IL17DQ8TAD2 202 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 EREGO14944 169 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 FGF6P10767 208 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 C18orf65Q6ZTR6 163 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 ERG28Q9UKR5 140 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 SPCS1Q9Y6A9 102 aa7.36□□□□□ -1.23
TRAPPC8-211ENST00000582539 H3BNG1 76 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 A0A096LNJ9 63 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 RPL13AP40429 203 aaKnown RBP7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 AMELXQ99217 191 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 VSIG2Q96IQ7 327 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 CR1P17927 2039 aa7.35□□□□□ -1.23
TRAPPC8-211ENST00000582539 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 WIPF1O43516 503 aa7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 HIVEP2P31629 2446 aa7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 MED13LQ71F56 2210 aa7.34□□□□□ -1.23
TRAPPC8-211ENST00000582539 A8MZ25 164 aa7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 DEFB130BP0DP73 79 aa7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 DEFB130AP0DP74 79 aa7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 MALP21145 153 aa7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 DEFB1P60022 68 aa7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 PHLDA1Q8WV24 401 aaPredicted RBP7.34□□□□□ -1.24
TRAPPC8-211ENST00000582539 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
TRAPPC8-211ENST00000582539 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
TRAPPC8-211ENST00000582539 SPATA25Q9BR10 227 aa7.33□□□□□ -1.24
TRAPPC8-211ENST00000582539 EMP1P54849 157 aa7.33□□□□□ -1.24
TRAPPC8-211ENST00000582539 SPTAN1Q13813 2472 aaKnown RBP7.32□□□□□ -1.24
TRAPPC8-211ENST00000582539 A0A0B4J2C4 111 aa7.32□□□□□ -1.24
TRAPPC8-211ENST00000582539 C15orf53Q8NAA6 179 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms