RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
CCDC42-203ENST00000581598 NUP35Q8NFH5 326 aa14.16□□□□□ -0.14
CCDC42-203ENST00000581598 LOC100131303A0A0U1RQF7 123 aa14.15□□□□□ -0.14
CCDC42-203ENST00000581598 CFAP126Q5VTH2 177 aa14.15□□□□□ -0.14
CCDC42-203ENST00000581598 WDR73Q6P4I2 378 aa14.15□□□□□ -0.14
CCDC42-203ENST00000581598 TRBV6-4A0A1B0GX49 114 aa14.14□□□□□ -0.15
CCDC42-203ENST00000581598 OR10AG1Q8NH19 301 aa14.14□□□□□ -0.15
CCDC42-203ENST00000581598 PGLYRP4Q96LB8 373 aa14.14□□□□□ -0.15
CCDC42-203ENST00000581598 A0A087WTM6 91 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 CACNG7P62955 275 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 RHOHQ15669 191 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 PIK3CD-AS1Q5SR53 167 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 PRADC1Q9BSG0 188 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 TPPP3Q9BW30 176 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 PHLDA3Q9Y5J5 127 aa14.13□□□□□ -0.15
CCDC42-203ENST00000581598 TRAV9-1A0A075B6T8 112 aa14.12□□□□□ -0.15
CCDC42-203ENST00000581598 CRYGDP07320 174 aa14.12□□□□□ -0.15
CCDC42-203ENST00000581598 KCNIP4Q6PIL6 250 aa14.12□□□□□ -0.15
CCDC42-203ENST00000581598 IGHV3-38A0A0C4DH36 116 aa14.11□□□□□ -0.15
CCDC42-203ENST00000581598 A0A1B0GUT8 65 aa14.11□□□□□ -0.15
CCDC42-203ENST00000581598 LINC01556Q5JQF7 62 aa14.11□□□□□ -0.15
CCDC42-203ENST00000581598 ZFP82Q8N141 532 aa14.11□□□□□ -0.15
CCDC42-203ENST00000581598 SMCO4Q9NRQ5 59 aa14.11□□□□□ -0.15
CCDC42-203ENST00000581598 S100PP25815 95 aa14.1□□□□□ -0.15
CCDC42-203ENST00000581598 DMRTA1Q5VZB9 504 aa14.1□□□□□ -0.15
CCDC42-203ENST00000581598 YPEL4Q96NS1 127 aa14.1□□□□□ -0.15
CCDC42-203ENST00000581598 MUC21A0A0G2JKD1 596 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 MUC21A0A140T8X8 626 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 SPANXN1Q5VSR9 72 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 ATP5L2Q7Z4Y8 100 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 CBLN2Q8IUK8 224 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 SYT8Q8NBV8 401 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 BORCS7Q96B45 105 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 BTF3L4Q96K17 158 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 URGCP-MRPS24S4R325 110 aa14.09□□□□□ -0.15
CCDC42-203ENST00000581598 TRAV8-6A0A0B4J262 113 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 A0A1B0GXF2 115 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 M0R381 172 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 SCO1O75880 301 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 NTF3P20783 257 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 ELOBQ15370 118 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 ZFP2Q6ZN57 461 aa14.08□□□□□ -0.16
CCDC42-203ENST00000581598 RIGQ13278 110 aa14.07□□□□□ -0.16
CCDC42-203ENST00000581598 LELP1Q5T871 98 aa14.07□□□□□ -0.16
CCDC42-203ENST00000581598 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
CCDC42-203ENST00000581598 IGHV3-73A0A0B4J1V6 119 aa14.06□□□□□ -0.16
CCDC42-203ENST00000581598 A0A1B0GW15 77 aa14.06□□□□□ -0.16
CCDC42-203ENST00000581598 A8MWV9 139 aa14.06□□□□□ -0.16
CCDC42-203ENST00000581598 IBA57-AS1B1ANH7 110 aa14.06□□□□□ -0.16
CCDC42-203ENST00000581598 TWIST1Q15672 202 aa14.05□□□□□ -0.16
CCDC42-203ENST00000581598 OR10J3Q5JRS4 329 aa14.05□□□□□ -0.16
CCDC42-203ENST00000581598 MRPL54Q6P161 138 aaKnown RBP14.05□□□□□ -0.16
CCDC42-203ENST00000581598 GATD1Q8NB37 220 aa14.05□□□□□ -0.16
CCDC42-203ENST00000581598 ATP6V0E2Q8NHE4 81 aa14.05□□□□□ -0.16
CCDC42-203ENST00000581598 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
CCDC42-203ENST00000581598 FUSP35637 526 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC42-203ENST00000581598 HBBP68871 147 aa14.04□□□□□ -0.16
CCDC42-203ENST00000581598 RASL11AQ6T310 242 aa14.04□□□□□ -0.16
CCDC42-203ENST00000581598 AP1S3Q96PC3 154 aa14.04□□□□□ -0.16
CCDC42-203ENST00000581598 HERC1Q15751 4861 aa14.04□□□□□ -0.16
CCDC42-203ENST00000581598 TGIF2-C20orf24A0A0A6YYL0 155 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 TRGC1P0CF51 173 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 LINC00694P0DN24 101 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 XGP55808 180 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 SSTP61278 116 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 JPT2Q9H910 190 aa14.03□□□□□ -0.16
CCDC42-203ENST00000581598 LRCOL1A6NCL2 159 aa14.02□□□□□ -0.17
CCDC42-203ENST00000581598 S100A8P05109 93 aa14.02□□□□□ -0.17
CCDC42-203ENST00000581598 UFSP1Q6NVU6 142 aa14.02□□□□□ -0.17
CCDC42-203ENST00000581598 Q6ZSN1 163 aa14.02□□□□□ -0.17
CCDC42-203ENST00000581598 KIF25-AS1Q9Y6Z4 181 aa14.02□□□□□ -0.17
CCDC42-203ENST00000581598 KRTAP10-1P60331 282 aa14.01□□□□□ -0.17
CCDC42-203ENST00000581598 LAGE3Q14657 143 aa14.01□□□□□ -0.17
CCDC42-203ENST00000581598 TMEM191AQ9H0A3 160 aa14.01□□□□□ -0.17
CCDC42-203ENST00000581598 PSCAO43653 123 aa14□□□□□ -0.17
CCDC42-203ENST00000581598 CAMPP49913 170 aa14□□□□□ -0.17
CCDC42-203ENST00000581598 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
CCDC42-203ENST00000581598 SAMD10Q9BYL1 202 aa14□□□□□ -0.17
CCDC42-203ENST00000581598 EPM2AB3EWF7 344 aa13.99□□□□□ -0.17
CCDC42-203ENST00000581598 GCSHP23434 173 aa13.99□□□□□ -0.17
CCDC42-203ENST00000581598 COX19Q49B96 90 aa13.99□□□□□ -0.17
CCDC42-203ENST00000581598 COLCA2A8K830 154 aa13.98□□□□□ -0.17
CCDC42-203ENST00000581598 RHODO00212 210 aa13.98□□□□□ -0.17
CCDC42-203ENST00000581598 TMEM136Q6ZRR5 245 aa13.98□□□□□ -0.17
CCDC42-203ENST00000581598 C14orf178Q8N769 122 aaPredicted RBP13.98□□□□□ -0.17
CCDC42-203ENST00000581598 DPH3P1Q9H4G8 78 aa13.98□□□□□ -0.17
CCDC42-203ENST00000581598 A0A087WWL8 130 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 IGHV3-30P01768 117 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 IGHV3-33P01772 117 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 IGHV3-30-5P0DP03 117 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 SMIM15Q7Z3B0 74 aa13.97□□□□□ -0.17
CCDC42-203ENST00000581598 GAGE12JA6NER3 117 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 GAGE1Q13065 139 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 GAGE4Q13068 117 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 GAGE5Q13069 117 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 GAGE13Q4V321 117 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 GNB1LQ9BYB4 327 aa13.96□□□□□ -0.17
CCDC42-203ENST00000581598 Q9HAA7 133 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms