RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 LINC00862A6NCI5 91 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
TRAF4-214ENST00000580073 ADIRFQ15847 76 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 ZFP82Q8N141 532 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 OSTCQ9NRP0 149 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 KIF25-AS1Q9Y6Z4 181 aa8.97□□□□□ -0.97
TRAF4-214ENST00000580073 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 A8MWV9 139 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 J3QL48 77 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
TRAF4-214ENST00000580073 CTRLP40313 264 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 LELP1Q5T871 98 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 COMMD7Q86VX2 200 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 C14orf178Q8N769 122 aaPredicted RBP8.96□□□□□ -0.98
TRAF4-214ENST00000580073 SLC25A29Q8N8R3 303 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 SYT8Q8NBV8 401 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 TPPP3Q9BW30 176 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 Q9HAA7 133 aa8.96□□□□□ -0.98
TRAF4-214ENST00000580073 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
TRAF4-214ENST00000580073 TRAV8-3A0A0A6YYJ7 113 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 TMEM218A2RU14 115 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 FOXA3P55318 350 aaPredicted RBP8.94□□□□□ -0.98
TRAF4-214ENST00000580073 CT83Q5H943 113 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 PGLYRP4Q96LB8 373 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 CNFNQ9BYD5 112 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 VPS13BQ7Z7G8 4022 aa8.94□□□□□ -0.98
TRAF4-214ENST00000580073 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
TRAF4-214ENST00000580073 FAT1Q14517 4588 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 IGHV3-30P01768 117 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 IGHV3-33P01772 117 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 IGHV3-30-3P0DP02 117 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 IGHV3-30-5P0DP03 117 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 NTF3P20783 257 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 UQCC3Q6UW78 93 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 OR10G8Q8NGN5 311 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 ATP6V0E2Q8NHE4 81 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 RMI2Q96E14 147 aa8.93□□□□□ -0.98
TRAF4-214ENST00000580073 A8MWL6 223 aa8.92□□□□□ -0.98
TRAF4-214ENST00000580073 F2Z2F3 143 aa8.92□□□□□ -0.98
TRAF4-214ENST00000580073 CACNG7P62955 275 aa8.92□□□□□ -0.98
TRAF4-214ENST00000580073 WDR73Q6P4I2 378 aa8.92□□□□□ -0.98
TRAF4-214ENST00000580073 A0A087WWC5 75 aa8.91□□□□□ -0.98
TRAF4-214ENST00000580073 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
TRAF4-214ENST00000580073 LINC00694P0DN24 101 aa8.91□□□□□ -0.98
TRAF4-214ENST00000580073 HAMPP81172 84 aa8.91□□□□□ -0.98
TRAF4-214ENST00000580073 MYCBP2O75592 4640 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 SMIM27A0A1W2PRY6 76 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 RHODO00212 210 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 C15orf54Q8N8G6 183 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 DEFB104AQ8WTQ1 72 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 GFRA4Q9GZZ7 299 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 URGCP-MRPS24S4R325 110 aa8.9□□□□□ -0.98
TRAF4-214ENST00000580073 TWIST1Q15672 202 aa8.89□□□□□ -0.99
TRAF4-214ENST00000580073 C10orf91Q5T1B1 145 aa8.89□□□□□ -0.99
TRAF4-214ENST00000580073 FAM231BA6NCW3 169 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 GAGE12JA6NER3 117 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 F8W036 122 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 RAB4BP61018 213 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 GAGE1Q13065 139 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 GAGE4Q13068 117 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 GAGE5Q13069 117 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 GAGE13Q4V321 117 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 KCNIP4Q6PIL6 250 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 Q6ZSA8 131 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 AP1S3Q96PC3 154 aa8.88□□□□□ -0.99
TRAF4-214ENST00000580073 ZNF56Q15929 161 aa8.87□□□□□ -0.99
TRAF4-214ENST00000580073 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
TRAF4-214ENST00000580073 SEC11CQ9BY50 192 aa8.87□□□□□ -0.99
TRAF4-214ENST00000580073 SRRM2Q9UQ35 2752 aaKnown RBP8.87□□□□□ -0.99
TRAF4-214ENST00000580073 A0A1B0GUT8 65 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 M0QY20 66 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 MGPP08493 103 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 PNRC1Q12796 327 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-214ENST00000580073 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 CHCHD7Q9BUK0 85 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
TRAF4-214ENST00000580073 KRTAP29-1A8MX34 341 aaPredicted RBP8.85□□□□□ -0.99
TRAF4-214ENST00000580073 F5H697 171 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 ELOBQ15370 118 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 Q8N976 141 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 RNF185Q96GF1 192 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
TRAF4-214ENST00000580073 CARHSP1Q9Y2V2 147 aaKnown RBP8.85□□□□□ -0.99
TRAF4-214ENST00000580073 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-214ENST00000580073 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
TRAF4-214ENST00000580073 SMIM17P0DL12 118 aa8.84□□□□□ -0.99
TRAF4-214ENST00000580073 UBE2D3P61077 147 aa8.84□□□□□ -0.99
TRAF4-214ENST00000580073 UBE2D2P62837 147 aa8.84□□□□□ -0.99
TRAF4-214ENST00000580073 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms