RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 IGHV1OR15-1A0A075B7D0 117 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 IGHV3-16A0A0C4DH30 117 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 H3BUX3 64 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 M0QY20 66 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 SLC25A20O43772 301 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 TCL1BO95988 128 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 COX6CP09669 75 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 RPL13AP40429 203 aaKnown RBP3.92□□□□□ -1.78
CDH8-206ENST00000580044 CFHR3Q02985 330 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 KLHL30-AS1Q8NEE0 82 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 DCANP1Q8TF63 244 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 TMEM263Q8WUH6 116 aaKnown RBP3.92□□□□□ -1.78
CDH8-206ENST00000580044 COPS9Q8WXC6 57 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 RPL36ALQ969Q0 106 aaKnown RBP3.92□□□□□ -1.78
CDH8-206ENST00000580044 AMELXQ99217 191 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
CDH8-206ENST00000580044 CACNA1HO95180 2353 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 MUC4Q99102 2169 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 PCNX1Q96RV3 2341 aa3.92□□□□□ -1.78
CDH8-206ENST00000580044 A0A087WWL8 130 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TRAV12-3A0A0B4J271 114 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TRBV30A0A0K0K1B3 111 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 A4D1N5 150 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 F6UB75 175 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 H3BT86 120 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 K7EQG2 157 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TIMM17BO60830 172 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 IGHV3-11P01762 117 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 IGHV4-39P01824 125 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ZNF22P17026 224 aaPredicted RBP3.91□□□□□ -1.78
CDH8-206ENST00000580044 INSL3P51460 131 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 DSCR9P59020 149 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 RPL39P62891 51 aaKnown RBP3.91□□□□□ -1.78
CDH8-206ENST00000580044 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
CDH8-206ENST00000580044 Q1RN00 199 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 FAM74A4Q5TZK3 123 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ZFAND6Q6FIF0 208 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ANKRD29Q8N6D5 301 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TEX29Q8N6K0 151 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ZNRF2Q8NHG8 242 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 C10orf105Q8TEF2 133 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 PTH2Q96A98 100 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 TIMM21Q9BVV7 248 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 SPANXDQ9BXN6 97 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ZZEF1O43149 2961 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 CEP250Q9BV73 2442 aa3.91□□□□□ -1.78
CDH8-206ENST00000580044 ACACAQ13085 2346 aa3.9□□□□□ -1.78
CDH8-206ENST00000580044 IGLV4-3A0A075B6K6 122 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 A0A0J9YXY3 114 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 FAM240AA0A1B0GVK7 77 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 TINCRA0A1B0GVN0 87 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 A0A1W2PPR1 153 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 C9JAW5 83 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 SNCGO76070 127 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 CD28P10747 220 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 IFITM1P13164 125 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 SRD5A1P18405 259 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 PSMB8P28062 276 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 EMP1P54849 157 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 MRPS36P82909 103 aaKnown RBP3.9□□□□□ -1.79
CDH8-206ENST00000580044 Q6Q795 121 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 DNAJC30Q96LL9 226 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 CARD19Q96LW7 228 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 LINC00527Q9UJ94 153 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 CELSR3Q9NYQ7 3312 aa3.9□□□□□ -1.79
CDH8-206ENST00000580044 CNOT1A5YKK6 2376 aaKnown RBP3.9□□□□□ -1.79
CDH8-206ENST00000580044 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 B4DSR2 109 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 H3BMM0 161 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 J3QLI3 93 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 MT-ATP8P03928 68 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 MSMBP08118 114 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 XGP55808 180 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 KRTAP10-9P60411 292 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 ZNF415Q09FC8 603 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 CIRBPQ14011 172 aaKnown RBP3.89□□□□□ -1.79
CDH8-206ENST00000580044 LY6EQ16553 131 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 MIAQ16674 131 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 MUSTN1Q8IVN3 82 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 UBE2WQ96B02 151 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 CCL19Q99731 98 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
CDH8-206ENST00000580044 COL6A3P12111 3177 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 EP300Q09472 2414 aaPredicted RBP3.88□□□□□ -1.79
CDH8-206ENST00000580044 TRAV8-4A0A0B4J246 113 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 A0A0J9YXV3 536 aa3.88□□□□□ -1.79
CDH8-206ENST00000580044 SPRY2O43597 315 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms