RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 C19orf71A6NCJ1 209 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 TSPAN13O95857 204 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 ORM1P02763 201 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 MIFP14174 115 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 CKS1BP61024 79 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 Q8NAQ8 132 aa6.15□□□□□ -1.42
PRPF8-213ENST00000576407 DAZAP1Q96EP5 407 aaKnown RBP6.15□□□□□ -1.42
PRPF8-213ENST00000576407 COL7A1Q02388 2944 aa6.15□□□□□ -1.43
PRPF8-213ENST00000576407 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 HUWE1Q7Z6Z7 4374 aaKnown RBP6.14□□□□□ -1.43
PRPF8-213ENST00000576407 A0A1B0GW15 77 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 A0A1W2PPM0 123 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 DEFB4AO15263 64 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 GNRH2O43555 120 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 ZNF493Q6ZR52 646 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
PRPF8-213ENST00000576407 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 GFRA4Q9GZZ7 299 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 RNASE7Q9H1E1 156 aaKnown RBP6.14□□□□□ -1.43
PRPF8-213ENST00000576407 HIGD1BQ9P298 99 aa6.14□□□□□ -1.43
PRPF8-213ENST00000576407 TRGV11A0A075B6L2 103 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 TMSB15BA0A087X1C1 80 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 IGHV3-16A0A0C4DH30 117 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 P01737 135 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 NTF3P20783 257 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 EMP1P54849 157 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 TCTAP57738 103 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 IBA57Q5T440 356 aaKnown RBP6.13□□□□□ -1.43
PRPF8-213ENST00000576407 C11orf72Q8NBR9 251 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 ZNF479Q96JC4 524 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 SPANXDQ9BXN6 97 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 SPCS1Q9Y6A9 102 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 U3KQK5 164 aa6.13□□□□□ -1.43
PRPF8-213ENST00000576407 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
PRPF8-213ENST00000576407 ASIPP42127 132 aa6.12□□□□□ -1.43
PRPF8-213ENST00000576407 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
PRPF8-213ENST00000576407 C11orf68Q9H3H3 251 aaKnown RBP6.12□□□□□ -1.43
PRPF8-213ENST00000576407 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
PRPF8-213ENST00000576407 CYSLTR1Q9Y271 337 aa6.12□□□□□ -1.43
PRPF8-213ENST00000576407 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
PRPF8-213ENST00000576407 F2Z2F3 143 aa6.11□□□□□ -1.43
PRPF8-213ENST00000576407 RNASE3P12724 160 aaKnown RBP6.11□□□□□ -1.43
PRPF8-213ENST00000576407 S100A4P26447 101 aaKnown RBP6.11□□□□□ -1.43
PRPF8-213ENST00000576407 CRYBA4P53673 196 aa6.11□□□□□ -1.43
PRPF8-213ENST00000576407 TAL2Q16559 108 aa6.11□□□□□ -1.43
PRPF8-213ENST00000576407 IL17DQ8TAD2 202 aa6.11□□□□□ -1.43
PRPF8-213ENST00000576407 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
PRPF8-213ENST00000576407 TIMM8BQ9Y5J9 83 aaPredicted RBP6.11□□□□□ -1.43
PRPF8-213ENST00000576407 H3BVH4 76 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 ARMS2P0C7Q2 107 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 HBBP68871 147 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 DAZ2Q13117 558 aaKnown RBP6.1□□□□□ -1.43
PRPF8-213ENST00000576407 LGALS9BQ3B8N2 356 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 FAM222AQ5U5X8 452 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 LGALS9CQ6DKI2 356 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 RNASEKQ6P5S7 137 aaKnown RBP6.1□□□□□ -1.43
PRPF8-213ENST00000576407 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 GATD1Q8NB37 220 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 GEMIN7Q9H840 131 aaKnown RBP6.1□□□□□ -1.43
PRPF8-213ENST00000576407 PGPEP1Q9NXJ5 209 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
PRPF8-213ENST00000576407 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 A8MWL6 223 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.43
PRPF8-213ENST00000576407 SPINK4O60575 86 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 IGLC6P0CF74 106 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 SPART-AS1P0CW21 52 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 SMIM13P0DJ93 91 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 Q6ZVH6 145 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 SPXQ9BT56 116 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
PRPF8-213ENST00000576407 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 M0R2P5 195 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 SNAI2O43623 268 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 MED14OSP0DP75 135 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 SMAGPQ0VAQ4 97 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 GAGE5Q13069 117 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 GAGE6Q13070 117 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 SLAQ13239 276 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 Q6ZTI0 123 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 FAM19A2Q8N3H0 131 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 LINC00612Q8N6U2 182 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 TPPP3Q9BW30 176 aa6.08□□□□□ -1.44
PRPF8-213ENST00000576407 ERG28Q9UKR5 140 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms