RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
NDE1-209ENST00000574109 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
NDE1-209ENST00000574109 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
NDE1-209ENST00000574109 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 PPBPP02775 128 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 MT-ND6P03923 174 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 GAGE1Q13065 139 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 GAGE4Q13068 117 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 GAGE5Q13069 117 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 GAGE13Q4V321 117 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
NDE1-209ENST00000574109 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
NDE1-209ENST00000574109 MRPS16Q9Y3D3 137 aaKnown RBP9.4□□□□□ -0.9
NDE1-209ENST00000574109 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
NDE1-209ENST00000574109 HLA-DQA1P01909 254 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 RAB4AP20338 218 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 UBE2D3P61077 147 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 UBE2D2P62837 147 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
NDE1-209ENST00000574109 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 LCE6AA0A183 80 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 SMCO4Q9NRQ5 59 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
NDE1-209ENST00000574109 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
NDE1-209ENST00000574109 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
NDE1-209ENST00000574109 PHOX2AO14813 284 aa9.37□□□□□ -0.91
NDE1-209ENST00000574109 LELP1Q5T871 98 aa9.37□□□□□ -0.91
NDE1-209ENST00000574109 LYSTQ99698 3801 aa9.37□□□□□ -0.91
NDE1-209ENST00000574109 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 LY6G6CO95867 125 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 CKS2P33552 79 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 PKIAP61925 76 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 ESRGQ1W209 222 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
NDE1-209ENST00000574109 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 ORMDL3Q8N138 153 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 GNB1LQ9BYB4 327 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
NDE1-209ENST00000574109 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
NDE1-209ENST00000574109 K7EP13 123 aa9.35□□□□□ -0.91
NDE1-209ENST00000574109 TCAPO15273 167 aa9.35□□□□□ -0.91
NDE1-209ENST00000574109 ELOBQ15370 118 aa9.35□□□□□ -0.91
NDE1-209ENST00000574109 ST20Q9HBF5 79 aa9.35□□□□□ -0.91
NDE1-209ENST00000574109 PLECQ15149 4684 aaKnown RBP9.35□□□□□ -0.91
NDE1-209ENST00000574109 NCR2O95944 276 aa9.34□□□□□ -0.91
NDE1-209ENST00000574109 S100A1P23297 94 aa9.34□□□□□ -0.91
NDE1-209ENST00000574109 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
NDE1-209ENST00000574109 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
NDE1-209ENST00000574109 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
NDE1-209ENST00000574109 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
NDE1-209ENST00000574109 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 D6R8Y8 96 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
NDE1-209ENST00000574109 COTL1Q14019 142 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
NDE1-209ENST00000574109 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 Q9UF83 564 aa9.33□□□□□ -0.92
NDE1-209ENST00000574109 TRBV25-1A0A075B6N4 114 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 SIVA1O15304 175 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 APCSP02743 223 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 NRACQ8N912 160 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
NDE1-209ENST00000574109 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 I3L3M4 83 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 RPS10P46783 165 aaKnown RBP9.31□□□□□ -0.92
NDE1-209ENST00000574109 IQCJQ1A5X6 159 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 CBLN2Q8IUK8 224 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
NDE1-209ENST00000574109 TGIF2-C20orf24A0A0A6YYL0 155 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 ATP6V1G1O75348 118 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 TNFRSF6BO95407 300 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
NDE1-209ENST00000574109 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 YPEL4Q96NS1 127 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 SMIM2Q9BVW6 85 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 Q9H8V8 135 aa9.3□□□□□ -0.92
NDE1-209ENST00000574109 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 TRAV9-2A0A087WT02 112 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 VCYO14598 125 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 PMCHP20382 165 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 POLR2KP53803 58 aaKnown RBP9.29□□□□□ -0.92
NDE1-209ENST00000574109 MRPL18Q9H0U6 180 aaKnown RBP9.29□□□□□ -0.92
NDE1-209ENST00000574109 MAP1LC3AQ9H492 121 aa9.29□□□□□ -0.92
NDE1-209ENST00000574109 K7EMI3 77 aa9.28□□□□□ -0.92
NDE1-209ENST00000574109 NPYP01303 97 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms