RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.22
RPAIN-214ENST00000574003 C15orf54Q8N8G6 183 aa7.46□□□□□ -1.22
RPAIN-214ENST00000574003 A0A087WX48 190 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 INAFM2P0DMQ5 153 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 GNG4P50150 75 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 MEF2BQ02080 365 aaPredicted RBP7.45□□□□□ -1.22
RPAIN-214ENST00000574003 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 EIF5AL1Q6IS14 154 aaKnown RBP7.45□□□□□ -1.22
RPAIN-214ENST00000574003 SLC51BQ86UW2 128 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 C9orf62Q8N4C0 152 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 FER1L6-AS1Q8NA97 138 aa7.45□□□□□ -1.22
RPAIN-214ENST00000574003 DAZAP1Q96EP5 407 aaKnown RBP7.45□□□□□ -1.22
RPAIN-214ENST00000574003 GAGE6Q13070 117 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 SUMO4Q6EEV6 95 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 Q8N976 141 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 FRZBQ92765 325 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
RPAIN-214ENST00000574003 TEX46H3BTG2 121 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 IFNA1P01562 189 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 P01737 135 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 SMIM17P0DL12 118 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 LYZL1Q6UWQ5 148 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 TMEM70Q9BUB7 260 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 VAX2Q9UIW0 290 aa7.43□□□□□ -1.22
RPAIN-214ENST00000574003 K7EN84 100 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 M0QY20 66 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 PDE6DO43924 150 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
RPAIN-214ENST00000574003 NKX2-5P52952 324 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-214ENST00000574003 RPS20P60866 119 aaKnown RBP7.42□□□□□ -1.22
RPAIN-214ENST00000574003 KCNIP4Q6PIL6 250 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 ALKAL2Q6UX46 152 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 RMI2Q96E14 147 aa7.42□□□□□ -1.22
RPAIN-214ENST00000574003 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
RPAIN-214ENST00000574003 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
RPAIN-214ENST00000574003 OCC1Q8TAD7 63 aa7.41□□□□□ -1.22
RPAIN-214ENST00000574003 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
RPAIN-214ENST00000574003 HERC1Q15751 4861 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.22
RPAIN-214ENST00000574003 NTF3P20783 257 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 RBX1P62877 108 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 CACNG7P62955 275 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 ELOBQ15370 118 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 C1orf43Q9BWL3 253 aa7.4□□□□□ -1.22
RPAIN-214ENST00000574003 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.23
RPAIN-214ENST00000574003 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 A0A1B0GVG6 124 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 HLA-DQA1P01909 254 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 CRPP02741 224 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 FOXA3P55318 350 aaPredicted RBP7.39□□□□□ -1.23
RPAIN-214ENST00000574003 Q6ZSA8 131 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 LINC00269Q8N2A0 174 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 SMIM12Q96EX1 92 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
RPAIN-214ENST00000574003 XKRY2A2RUG3 117 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 CTRLP40313 264 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 CEBPGP53567 150 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 Q0VG73 95 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 TWIST1Q15672 202 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.38□□□□□ -1.23
RPAIN-214ENST00000574003 GTSF1Q8WW33 167 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 DPH3P1Q9H4G8 78 aa7.38□□□□□ -1.23
RPAIN-214ENST00000574003 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
RPAIN-214ENST00000574003 IGLV4-60A0A075B6I1 120 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 IGLV10-54A0A075B6I4 117 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 IGHV1-24A0A0C4DH33 117 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 USP17L23D6RBM5 183 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 F2Z2F3 143 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 IQCJQ1A5X6 159 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 KRTAP26-1Q6PEX3 210 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 SCXQ7RTU7 201 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 LINC00528Q8N1L1 170 aa7.37□□□□□ -1.23
RPAIN-214ENST00000574003 PRSS1P07477 247 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 TMEM97Q5BJF2 176 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 C20orf203Q8NBC4 194 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
RPAIN-214ENST00000574003 BIN3Q9NQY0 253 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
RPAIN-214ENST00000574003 H7C1H1 209 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 TAGLN2P37802 199 aaKnown RBP7.35□□□□□ -1.23
RPAIN-214ENST00000574003 BLOC1S1P78537 153 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 MIAQ16674 131 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 PGLYRP4Q96LB8 373 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms