RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 F5H697 171 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
CHD3-216ENST00000573936 GAGE1Q13065 139 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 GAGE4Q13068 117 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 GAGE5Q13069 117 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
CHD3-216ENST00000573936 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 GTSF1LQ9H1H1 148 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 TMEM242Q9NWH2 141 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 MSRB1Q9NZV6 116 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 KIF25-AS1Q9Y6Z4 181 aa7.59□□□□□ -1.19
CHD3-216ENST00000573936 NACAE9PAV3 2078 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 IGLV2-18A0A075B6J9 118 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 H7C1H1 209 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 M0R2N4 97 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 TTC32Q5I0X7 151 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
CHD3-216ENST00000573936 NUP35Q8NFH5 326 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
CHD3-216ENST00000573936 TRBV7-3A0A075B6L6 115 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 SIVA1O15304 175 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 MGPP08493 103 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 EVI2AP22794 236 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 RIGQ13278 110 aa7.57□□□□□ -1.2
CHD3-216ENST00000573936 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 K7EP13 123 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 SCO1O75880 301 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 LINC00315P59091 139 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 LELP1Q5T871 98 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 KCNIP4Q6PIL6 250 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 Q6ZR54 194 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 CBLN2Q8IUK8 224 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 DNAJC30Q96LL9 226 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 URGCP-MRPS24S4R325 110 aa7.56□□□□□ -1.2
CHD3-216ENST00000573936 BTF3P20290 206 aaKnown RBP7.55□□□□□ -1.2
CHD3-216ENST00000573936 S100PP25815 95 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 UBE2D3P61077 147 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 UBE2D2P62837 147 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 NEXN-AS1Q8NBZ9 246 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 TNFRSF18Q9Y5U5 241 aa7.55□□□□□ -1.2
CHD3-216ENST00000573936 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 M0QY20 66 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 MRPL54Q6P161 138 aaKnown RBP7.54□□□□□ -1.2
CHD3-216ENST00000573936 RASL11AQ6T310 242 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 FRZBQ92765 325 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 YPEL4Q96NS1 127 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 Q9UF83 564 aa7.54□□□□□ -1.2
CHD3-216ENST00000573936 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
CHD3-216ENST00000573936 A0A1B0GW15 77 aa7.53□□□□□ -1.2
CHD3-216ENST00000573936 ELOBQ15370 118 aa7.53□□□□□ -1.2
CHD3-216ENST00000573936 DAZ4Q86SG3 579 aaKnown RBP7.53□□□□□ -1.2
CHD3-216ENST00000573936 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
CHD3-216ENST00000573936 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
CHD3-216ENST00000573936 DAZ3Q9NR90 486 aaKnown RBP7.53□□□□□ -1.2
CHD3-216ENST00000573936 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 S100A8P05109 93 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 HBBP68871 147 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 WFDC10BQ8IUB3 73 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 C6orf223Q8N319 242 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 C10orf126Q8N4M7 172 aa7.52□□□□□ -1.21
CHD3-216ENST00000573936 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 PRSS29PA6NIE9 313 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 CAMPP49913 170 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
CHD3-216ENST00000573936 PKIAP61925 76 aa7.5□□□□□ -1.21
CHD3-216ENST00000573936 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
CHD3-216ENST00000573936 HSPG2P98160 4391 aa7.5□□□□□ -1.21
CHD3-216ENST00000573936 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
CHD3-216ENST00000573936 PPP1R17O96001 155 aa7.49□□□□□ -1.21
CHD3-216ENST00000573936 RAB4AP20338 218 aa7.49□□□□□ -1.21
CHD3-216ENST00000573936 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
CHD3-216ENST00000573936 CHCHD7Q9BUK0 85 aa7.49□□□□□ -1.21
CHD3-216ENST00000573936 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 COLCA2A8K830 154 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 RTL8CO15255 209 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
CHD3-216ENST00000573936 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms