RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 GATCO43716 136 aaKnown RBP18.62■□□□□ 0.57
SCARF1-207ENST00000573867 M0QY20 66 aa18.61■□□□□ 0.57
SCARF1-207ENST00000573867 SUMO4Q6EEV6 95 aa18.61■□□□□ 0.57
SCARF1-207ENST00000573867 WDR73Q6P4I2 378 aa18.61■□□□□ 0.57
SCARF1-207ENST00000573867 DAZ4Q86SG3 579 aaKnown RBP18.61■□□□□ 0.57
SCARF1-207ENST00000573867 DAZ3Q9NR90 486 aaKnown RBP18.61■□□□□ 0.57
SCARF1-207ENST00000573867 C16orf90A8MZG2 172 aa18.6■□□□□ 0.57
SCARF1-207ENST00000573867 Q9HAA7 133 aa18.6■□□□□ 0.57
SCARF1-207ENST00000573867 RYR1P21817 5038 aa18.59■□□□□ 0.57
SCARF1-207ENST00000573867 TRGC1P0CF51 173 aa18.59■□□□□ 0.57
SCARF1-207ENST00000573867 ERVFC1-1P60608 527 aa18.59■□□□□ 0.57
SCARF1-207ENST00000573867 NIT1Q86X76 327 aa18.59■□□□□ 0.57
SCARF1-207ENST00000573867 APOBP04114 4563 aaKnown RBP18.58■□□□□ 0.56
SCARF1-207ENST00000573867 A0A087WTM6 91 aa18.57■□□□□ 0.56
SCARF1-207ENST00000573867 FUSP35637 526 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCARF1-207ENST00000573867 TWIST1Q15672 202 aa18.57■□□□□ 0.56
SCARF1-207ENST00000573867 DPH3P1Q9H4G8 78 aa18.57■□□□□ 0.56
SCARF1-207ENST00000573867 TRBV6-8A0A0A6YYG3 113 aa18.56■□□□□ 0.56
SCARF1-207ENST00000573867 CT83Q5H943 113 aa18.56■□□□□ 0.56
SCARF1-207ENST00000573867 NTM-AS1Q6ZSK4 140 aa18.56■□□□□ 0.56
SCARF1-207ENST00000573867 HSPG2P98160 4391 aa18.55■□□□□ 0.56
SCARF1-207ENST00000573867 A8MWL6 223 aa18.55■□□□□ 0.56
SCARF1-207ENST00000573867 LAGE3Q14657 143 aa18.55■□□□□ 0.56
SCARF1-207ENST00000573867 PGLYRP4Q96LB8 373 aa18.55■□□□□ 0.56
SCARF1-207ENST00000573867 FOXA3P55318 350 aaPredicted RBP18.54■□□□□ 0.56
SCARF1-207ENST00000573867 OSTCQ9NRP0 149 aa18.54■□□□□ 0.56
SCARF1-207ENST00000573867 DNAJC30Q96LL9 226 aa18.53■□□□□ 0.56
SCARF1-207ENST00000573867 RPL23P62829 140 aaKnown RBP18.52■□□□□ 0.56
SCARF1-207ENST00000573867 ISOC2Q96AB3 205 aa18.52■□□□□ 0.56
SCARF1-207ENST00000573867 LRCOL1A6NCL2 159 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 H7C1H1 209 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 PEA15Q15121 130 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 TMEM241Q24JQ0 296 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 FAM74A3Q4VXF1 159 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 RASL11AQ6T310 242 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 V9GYV3 84 aa18.51■□□□□ 0.55
SCARF1-207ENST00000573867 TSKUQ8WUA8 353 aa18.5■□□□□ 0.55
SCARF1-207ENST00000573867 URGCP-MRPS24S4R325 110 aa18.49■□□□□ 0.55
SCARF1-207ENST00000573867 TRAV26-2A0A0B4J265 109 aa18.48■□□□□ 0.55
SCARF1-207ENST00000573867 GATD1Q8NB37 220 aa18.48■□□□□ 0.55
SCARF1-207ENST00000573867 KLK12Q9UKR0 248 aa18.48■□□□□ 0.55
SCARF1-207ENST00000573867 A0A087WX48 190 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 HIGD1CA8MV81 97 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 EREGO14944 169 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 PSCAO43653 123 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 CHCHD7Q9BUK0 85 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 SMDT1Q9H4I9 107 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 NIT2Q9NQR4 276 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 NAT8Q9UHE5 227 aa18.47■□□□□ 0.55
SCARF1-207ENST00000573867 ADIRFQ15847 76 aa18.46■□□□□ 0.55
SCARF1-207ENST00000573867 MPV17L2Q567V2 206 aa18.46■□□□□ 0.55
SCARF1-207ENST00000573867 GFRA4Q9GZZ7 299 aa18.46■□□□□ 0.55
SCARF1-207ENST00000573867 TRAV8-3A0A0A6YYJ7 113 aa18.45■□□□□ 0.54
SCARF1-207ENST00000573867 TMEM262E9PQX1 116 aa18.45■□□□□ 0.54
SCARF1-207ENST00000573867 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-207ENST00000573867 CHCHD5Q9BSY4 110 aa18.45■□□□□ 0.54
SCARF1-207ENST00000573867 WFDC2Q14508 124 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 TMEM97Q5BJF2 176 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 MAPKAPK5-AS1Q8N8E1 139 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 C15orf54Q8N8G6 183 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 DEFB104AQ8WTQ1 72 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 PGPEP1Q9NXJ5 209 aa18.44■□□□□ 0.54
SCARF1-207ENST00000573867 FAM231BA6NCW3 169 aa18.43■□□□□ 0.54
SCARF1-207ENST00000573867 IQCJQ1A5X6 159 aa18.43■□□□□ 0.54
SCARF1-207ENST00000573867 A0A1B0GUT8 65 aa18.42■□□□□ 0.54
SCARF1-207ENST00000573867 Q8N976 141 aa18.42■□□□□ 0.54
SCARF1-207ENST00000573867 UBE2WQ96B02 151 aa18.42■□□□□ 0.54
SCARF1-207ENST00000573867 RPL39LQ96EH5 51 aaKnown RBP18.42■□□□□ 0.54
SCARF1-207ENST00000573867 TM2D2Q9BX73 214 aa18.42■□□□□ 0.54
SCARF1-207ENST00000573867 GAGE6Q13070 117 aa18.41■□□□□ 0.54
SCARF1-207ENST00000573867 ATRAIDQ6UW56 229 aa18.41■□□□□ 0.54
SCARF1-207ENST00000573867 SMIM15Q7Z3B0 74 aa18.41■□□□□ 0.54
SCARF1-207ENST00000573867 NUP35Q8NFH5 326 aa18.41■□□□□ 0.54
SCARF1-207ENST00000573867 KRTAP17-1Q9BYP8 105 aa18.41■□□□□ 0.54
SCARF1-207ENST00000573867 TRBV25-1A0A075B6N4 114 aa18.4■□□□□ 0.54
SCARF1-207ENST00000573867 KCNIP4Q6PIL6 250 aa18.4■□□□□ 0.54
SCARF1-207ENST00000573867 IGHV1-24A0A0C4DH33 117 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 GAS8-AS1O95177 125 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 ELOBQ15370 118 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 CDPF1Q6NVV7 123 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 ENHOQ6UWT2 76 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 BORCS7Q96B45 105 aa18.39■□□□□ 0.53
SCARF1-207ENST00000573867 CDK2AP2O75956 126 aa18.38■□□□□ 0.53
SCARF1-207ENST00000573867 RBX1P62877 108 aa18.38■□□□□ 0.53
SCARF1-207ENST00000573867 FRZBQ92765 325 aa18.38■□□□□ 0.53
SCARF1-207ENST00000573867 Q8N814 137 aa18.37■□□□□ 0.53
SCARF1-207ENST00000573867 RNF185Q96GF1 192 aa18.37■□□□□ 0.53
SCARF1-207ENST00000573867 TMEM191AQ9H0A3 160 aa18.37■□□□□ 0.53
SCARF1-207ENST00000573867 IGKV2D-24A0A075B6R9 120 aa18.36■□□□□ 0.53
SCARF1-207ENST00000573867 LECT2O14960 151 aa18.36■□□□□ 0.53
SCARF1-207ENST00000573867 IFITM2Q01629 132 aa18.36■□□□□ 0.53
SCARF1-207ENST00000573867 ANGP03950 147 aaKnown RBP18.35■□□□□ 0.53
SCARF1-207ENST00000573867 KRTAP10-1P60331 282 aa18.35■□□□□ 0.53
SCARF1-207ENST00000573867 SMIM27A0A1W2PRY6 76 aa18.34■□□□□ 0.53
SCARF1-207ENST00000573867 RAB14P61106 215 aa18.34■□□□□ 0.53
SCARF1-207ENST00000573867 PKIAP61925 76 aa18.34■□□□□ 0.53
SCARF1-207ENST00000573867 BAALCQ8WXS3 180 aa18.34■□□□□ 0.53
SCARF1-207ENST00000573867 TMEM243Q9BU79 118 aa18.34■□□□□ 0.53
SCARF1-207ENST00000573867 AMN1Q8IY45 258 aa18.33■□□□□ 0.52
SCARF1-207ENST00000573867 RMI2Q96E14 147 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms