RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GEMIN7Q9H840 131 aaKnown RBP8.01□□□□□ -1.13
CCDC40-207ENST00000572253 MDFICQ9P1T7 246 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 TRAV12-2A0A075B6T6 113 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 A0A0J9YX75 114 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 A4D1N5 150 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 Q8N1Y9 231 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 DCHS2Q6V1P9 2916 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 H7C2G1 150 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 RAX2Q96IS3 184 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 CDIP1Q9H305 208 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 SPTBN4Q9H254 2564 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 RHODO00212 210 aa8□□□□□ -1.13
CCDC40-207ENST00000572253 IGHV3-64A0A075B6Q5 118 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 SLC25A20O43772 301 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 MSMBP08118 114 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 SPINK13Q1W4C9 94 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 Q6ZUT4 128 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 OPRPNQ99935 248 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-207ENST00000572253 CCDC168Q8NDH2 2452 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
CCDC40-207ENST00000572253 HRNRQ86YZ3 2850 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-207ENST00000572253 C9JAW5 83 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 ATP5J2P56134 94 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 C19orf84I3L1E1 186 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-207ENST00000572253 LY6DQ14210 128 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 AMELXQ99217 191 aa7.99□□□□□ -1.13
CCDC40-207ENST00000572253 CD28P10747 220 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 EDN2P20800 178 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 CHD8Q9HCK8 2581 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 IGHV3-33P01772 117 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 MT-ATP8P03928 68 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 CFHR3Q02985 330 aa7.98□□□□□ -1.13
CCDC40-207ENST00000572253 K7EQG2 157 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 ATXN8Q156A1 80 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 M0R2P5 195 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 TIMM21Q9BVV7 248 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 IGLV4-3A0A075B6K6 122 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 P0DMU3 169 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 FAM231AP0DMU4 169 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 FAM231CP0DMU5 169 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 TMEM95Q3KNT9 176 aa7.97□□□□□ -1.13
CCDC40-207ENST00000572253 TMEM263Q8WUH6 116 aaKnown RBP7.97□□□□□ -1.13
CCDC40-207ENST00000572253 TMEM89A2RUT3 159 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 TNFRSF18Q9Y5U5 241 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 PRSS2P07478 247 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 PSMB8P28062 276 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 XGP55808 180 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.13
CCDC40-207ENST00000572253 B4DSR2 109 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 M0QXV9 152 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 GNLYP22749 145 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 SMIM20Q8N5G0 67 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 SPXQ9BT56 116 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 MYO9AB2RTY4 2548 aa7.96□□□□□ -1.14
CCDC40-207ENST00000572253 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 A0A0J9YXY3 114 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 PYGO1Q9Y3Y4 419 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 COX6CP09669 75 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 ABCA2Q9BZC7 2435 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 HTN1P15515 57 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 ZFAND6Q6FIF0 208 aa7.95□□□□□ -1.14
CCDC40-207ENST00000572253 BEX4Q9NWD9 120 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-207ENST00000572253 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 GATA3P23771 443 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 KHDC1LQ5JSQ8 128 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 GAGE2BQ13066 116 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
CCDC40-207ENST00000572253 FHL3Q13643 280 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 YAE1D1Q9NRH1 226 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 IGHV4-59P01825 116 aa7.93□□□□□ -1.14
CCDC40-207ENST00000572253 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-207ENST00000572253 B5MCH6 92 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 CLUHP3Q96NS8 147 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 DUX5Q96PT3 197 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 DUX3Q96PT4 197 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 TLN2Q9Y4G6 2542 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 TRAV26-1A0A087WT03 109 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 IGHV1-58A0A0C4DH39 117 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 ADARB2-AS1A8MUL3 147 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
CCDC40-207ENST00000572253 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 CSMD1Q96PZ7 3565 aa7.92□□□□□ -1.14
CCDC40-207ENST00000572253 EDA2RQ9HAV5 297 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms