RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MT-ND6P03923 174 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 S100A8P05109 93 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 PSG3Q16557 428 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 SMUG1Q53HV7 270 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 OR8I2Q8N0Y5 310 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 EXOC3-AS1Q8N2X6 119 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 OR4B1Q8NGF8 309 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 CMTM2Q8TAZ6 248 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 SLC50A1Q9BRV3 221 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 GNB1LQ9BYB4 327 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 GFRA4Q9GZZ7 299 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 RNASE7Q9H1E1 156 aaKnown RBP4.61□□□□□ -1.67
CHD3-213ENST00000571249 SAV1Q9H4B6 383 aaPredicted RBP4.61□□□□□ -1.67
CHD3-213ENST00000571249 ZNF331Q9NQX6 463 aaPredicted RBP4.61□□□□□ -1.67
CHD3-213ENST00000571249 RBAKDNA6NC62 111 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 PRM2P04554 102 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 MGST1P10620 155 aaKnown RBP4.6□□□□□ -1.67
CHD3-213ENST00000571249 HLA-DRB4P13762 266 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 CDKN1BP46527 198 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
CHD3-213ENST00000571249 SEC61GP60059 68 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 FABP9Q0Z7S8 132 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 GOLT1AQ6ZVE7 132 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 Q8N814 137 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 TSKUQ8WUA8 353 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 METTL26Q96S19 204 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 PSG8Q9UQ74 426 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 HLA-DRB4X5D2U9 266 aa4.6□□□□□ -1.67
CHD3-213ENST00000571249 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 A0A1W2PS18 150 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 LRCOL1A6NCL2 159 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 IFITM10A6NMD0 228 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 ZNF705GA8MUZ8 300 aaPredicted RBP4.59□□□□□ -1.67
CHD3-213ENST00000571249 A8MWL6 223 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 M0R3E3 92 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 SNRPCP09234 159 aaKnown RBP4.59□□□□□ -1.67
CHD3-213ENST00000571249 CSN1S1P47710 185 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 NDUFA6P56556 154 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 DEFB1P60022 68 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
CHD3-213ENST00000571249 SAPCD1Q5SSQ6 148 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 GDF5OSQ5U4N7 250 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 TMEM136Q6ZRR5 245 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 TMEM208Q9BTX3 173 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 RPP21Q9H633 154 aaKnown RBP4.59□□□□□ -1.67
CHD3-213ENST00000571249 NAT8BQ9UHF3 227 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 TRAPPC1Q9Y5R8 145 aa4.59□□□□□ -1.67
CHD3-213ENST00000571249 TRAV8-1A0A0A6YYK1 113 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 TRAV8-2A0A0B4J237 113 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 NXPH4O95158 308 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 P01737 135 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 HLA-DQA1P01909 254 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 SMIM6P0DI80 62 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 ESDP10768 282 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 AMTP48728 403 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 CRIP1P50238 77 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 SNRPD3P62318 126 aaKnown RBP4.58□□□□□ -1.68
CHD3-213ENST00000571249 Q0VG73 95 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 LINC01620Q4KN68 170 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 GATD1Q8NB37 220 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 NUP35Q8NFH5 326 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 ZC2HC1AQ96GY0 325 aa4.58□□□□□ -1.68
CHD3-213ENST00000571249 TRAV9-2A0A087WT02 112 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 SOCS3O14543 225 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 PSCAO43653 123 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 CIDEAO60543 219 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 Q6AWC8 147 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 C9orf47Q6ZRZ4 202 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 OR4C5Q8NGB2 326 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 CIRBP-AS1Q8TBR5 109 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 GTSF1Q8WW33 167 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 PACRGQ96M98 296 aaPredicted RBP4.57□□□□□ -1.68
CHD3-213ENST00000571249 CHAC1Q9BUX1 264 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 LENEPQ9Y5L5 61 aa4.57□□□□□ -1.68
CHD3-213ENST00000571249 A0A1B0GW15 77 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 PLAC8L1A1L4L8 177 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 HIGD1CA8MV81 97 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 SNURFLB1AK76 121 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 AZU1P20160 251 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 AKR1D1P51857 326 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 GFI1BQ5VTD9 330 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 SAMD13Q5VXD3 122 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 Q6ZRU5 148 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 URB1-AS1Q96HZ7 61 aa4.56□□□□□ -1.68
CHD3-213ENST00000571249 IGKV2-40A0A087WW87 121 aaPredicted RBP4.55□□□□□ -1.68
CHD3-213ENST00000571249 A0A096LPF7 62 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 PRAC2D3DTV9 90 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 H3BNG1 76 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 IGKV2D-40P01614 121 aaPredicted RBP4.55□□□□□ -1.68
CHD3-213ENST00000571249 CT45A10P0DMU9 189 aa4.55□□□□□ -1.68
CHD3-213ENST00000571249 CRISP2P16562 243 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms