RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 CTRLP40313 264 aa8.52□□□□□ -1.05
TVP23B-204ENST00000571018 CEBPGP53567 150 aa8.52□□□□□ -1.05
TVP23B-204ENST00000571018 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
TVP23B-204ENST00000571018 SPATA12Q7Z6I5 190 aa8.52□□□□□ -1.05
TVP23B-204ENST00000571018 C16orf90A8MZG2 172 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 LAGE3Q14657 143 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 SMIM7Q9BQ49 75 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
TVP23B-204ENST00000571018 ZNF727A8MUV8 499 aa8.5□□□□□ -1.05
TVP23B-204ENST00000571018 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
TVP23B-204ENST00000571018 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
TVP23B-204ENST00000571018 NIT1Q86X76 327 aa8.5□□□□□ -1.05
TVP23B-204ENST00000571018 GTSF1Q8WW33 167 aa8.5□□□□□ -1.05
TVP23B-204ENST00000571018 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
TVP23B-204ENST00000571018 PKD1P98161 4303 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 A0A087WTM6 91 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 TRBV6-8A0A0A6YYG3 113 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 A8MWL6 223 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 H7C1H1 209 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 M0QY20 66 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 MGPP08493 103 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
TVP23B-204ENST00000571018 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.49□□□□□ -1.05
TVP23B-204ENST00000571018 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
TVP23B-204ENST00000571018 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
TVP23B-204ENST00000571018 TWIST1Q15672 202 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 CT83Q5H943 113 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 Q9HAA7 133 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 URGCP-MRPS24S4R325 110 aa8.48□□□□□ -1.05
TVP23B-204ENST00000571018 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 PSCAO43653 123 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
TVP23B-204ENST00000571018 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 TMEM97Q5BJF2 176 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 RASL11AQ6T310 242 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 OSTCQ9NRP0 149 aa8.47□□□□□ -1.05
TVP23B-204ENST00000571018 A0A087WX48 190 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 C9JQL5 133 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 H3BS24 57 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 PEA15Q15121 130 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 TMEM241Q24JQ0 296 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 TM2D2Q9BX73 214 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
TVP23B-204ENST00000571018 SRSF3P84103 164 aaKnown RBP8.45□□□□□ -1.06
TVP23B-204ENST00000571018 ELOBQ15370 118 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 ANAPC16Q96DE5 110 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 PGLYRP4Q96LB8 373 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 NIT2Q9NQR4 276 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 KLK12Q9UKR0 248 aa8.45□□□□□ -1.06
TVP23B-204ENST00000571018 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 CDK2AP2O75956 126 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 KCNIP4Q6PIL6 250 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 C15orf54Q8N8G6 183 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 FRZBQ92765 325 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
TVP23B-204ENST00000571018 PKIAP61925 76 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
TVP23B-204ENST00000571018 IQCJQ1A5X6 159 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 BORCS7Q96B45 105 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 V9GYV3 84 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 PKHD1P08F94 4074 aa8.43□□□□□ -1.06
TVP23B-204ENST00000571018 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 LOC100996750A0A140TA64 210 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
TVP23B-204ENST00000571018 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 RMI2Q96E14 147 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
TVP23B-204ENST00000571018 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
TVP23B-204ENST00000571018 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 A0A1B0GUT8 65 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 Q0VG73 95 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 ADIRFQ15847 76 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 ATRAIDQ6UW56 229 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 HERC2O95714 4834 aa8.41□□□□□ -1.06
TVP23B-204ENST00000571018 TRAV26-2A0A0B4J265 109 aa8.4□□□□□ -1.06
TVP23B-204ENST00000571018 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
TVP23B-204ENST00000571018 Q8N814 137 aa8.4□□□□□ -1.06
TVP23B-204ENST00000571018 Q8N976 141 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms