RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
SPG7-221ENST00000569720 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
SPG7-221ENST00000569720 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
SPG7-221ENST00000569720 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
SPG7-221ENST00000569720 A0A1B0GW15 77 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 SMIM27A0A1W2PRY6 76 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 C7orf77A4D0Y5 90 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 RHOHQ15669 191 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 OR10J3Q5JRS4 329 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 Q5VSD8 79 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 C9orf85Q96MD7 179 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 CNFNQ9BYD5 112 aa8.84□□□□□ -0.99
SPG7-221ENST00000569720 IGLV5-52A0A0A0MRZ9 124 aa8.83□□□□□ -1
SPG7-221ENST00000569720 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
SPG7-221ENST00000569720 RS1O15537 224 aa8.83□□□□□ -1
SPG7-221ENST00000569720 S100A8P05109 93 aa8.83□□□□□ -1
SPG7-221ENST00000569720 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
SPG7-221ENST00000569720 S100PP25815 95 aa8.83□□□□□ -1
SPG7-221ENST00000569720 CFAP126Q5VTH2 177 aa8.83□□□□□ -1
SPG7-221ENST00000569720 ZFP82Q8N141 532 aa8.83□□□□□ -1
SPG7-221ENST00000569720 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
SPG7-221ENST00000569720 FER1L6-AS1Q8NA97 138 aa8.83□□□□□ -1
SPG7-221ENST00000569720 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
SPG7-221ENST00000569720 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
SPG7-221ENST00000569720 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
SPG7-221ENST00000569720 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
SPG7-221ENST00000569720 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
SPG7-221ENST00000569720 CTRLP40313 264 aa8.82□□□□□ -1
SPG7-221ENST00000569720 ATP5L2Q7Z4Y8 100 aa8.82□□□□□ -1
SPG7-221ENST00000569720 RPS10P5Q9NQ39 176 aa8.82□□□□□ -1
SPG7-221ENST00000569720 HERC1Q15751 4861 aa8.82□□□□□ -1
SPG7-221ENST00000569720 HIGD1CA8MV81 97 aa8.81□□□□□ -1
SPG7-221ENST00000569720 A8MWV9 139 aa8.81□□□□□ -1
SPG7-221ENST00000569720 FAM229AH3BQW9 127 aa8.81□□□□□ -1
SPG7-221ENST00000569720 COX19Q49B96 90 aa8.81□□□□□ -1
SPG7-221ENST00000569720 LELP1Q5T871 98 aa8.81□□□□□ -1
SPG7-221ENST00000569720 RASL11AQ6T310 242 aa8.81□□□□□ -1
SPG7-221ENST00000569720 Q9HAA7 133 aa8.81□□□□□ -1
SPG7-221ENST00000569720 IGHV3-73A0A0B4J1V6 119 aa8.8□□□□□ -1
SPG7-221ENST00000569720 A0A1B0GUT8 65 aa8.8□□□□□ -1
SPG7-221ENST00000569720 IGHV3-30P01768 117 aa8.8□□□□□ -1
SPG7-221ENST00000569720 IGHV3-33P01772 117 aa8.8□□□□□ -1
SPG7-221ENST00000569720 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
SPG7-221ENST00000569720 TRGC1P0CF51 173 aa8.8□□□□□ -1
SPG7-221ENST00000569720 IGHV3-30-3P0DP02 117 aa8.8□□□□□ -1
SPG7-221ENST00000569720 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
SPG7-221ENST00000569720 RIGQ13278 110 aa8.8□□□□□ -1
SPG7-221ENST00000569720 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
SPG7-221ENST00000569720 SMIM15Q7Z3B0 74 aa8.8□□□□□ -1
SPG7-221ENST00000569720 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
SPG7-221ENST00000569720 TMEM70Q9BUB7 260 aa8.8□□□□□ -1
SPG7-221ENST00000569720 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
SPG7-221ENST00000569720 TMSB15BA0A087X1C1 80 aa8.79□□□□□ -1
SPG7-221ENST00000569720 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
SPG7-221ENST00000569720 LRCOL1A6NCL2 159 aa8.79□□□□□ -1
SPG7-221ENST00000569720 H3BVH4 76 aa8.79□□□□□ -1
SPG7-221ENST00000569720 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
SPG7-221ENST00000569720 TM2D2Q9BX73 214 aa8.79□□□□□ -1
SPG7-221ENST00000569720 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
SPG7-221ENST00000569720 DNAH8Q96JB1 4490 aa8.79□□□□□ -1
SPG7-221ENST00000569720 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
SPG7-221ENST00000569720 RHODO00212 210 aa8.78□□□□□ -1
SPG7-221ENST00000569720 LAGE3Q14657 143 aa8.78□□□□□ -1
SPG7-221ENST00000569720 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
SPG7-221ENST00000569720 Q8N814 137 aa8.78□□□□□ -1
SPG7-221ENST00000569720 NUP35Q8NFH5 326 aa8.78□□□□□ -1
SPG7-221ENST00000569720 GTSF1Q8WW33 167 aa8.78□□□□□ -1
SPG7-221ENST00000569720 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
SPG7-221ENST00000569720 SMIM17P0DL12 118 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 GZMBP10144 247 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 NTF3P20783 257 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 Q6ZSN1 163 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 AP1S3Q96PC3 154 aa8.76□□□□□ -1.01
SPG7-221ENST00000569720 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 TRAV8-3A0A0A6YYJ7 113 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 HAMPP81172 84 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 TWIST1Q15672 202 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
SPG7-221ENST00000569720 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 M0R381 172 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 HBBP68871 147 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 GAGE1Q13065 139 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 GAGE4Q13068 117 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 GAGE5Q13069 117 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 GAGE13Q4V321 117 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 OR10AG1Q8NH19 301 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 TMEM191AQ9H0A3 160 aa8.74□□□□□ -1.01
SPG7-221ENST00000569720 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
SPG7-221ENST00000569720 PPP1R17O96001 155 aa8.73□□□□□ -1.01
SPG7-221ENST00000569720 MT-ND6P03923 174 aa8.73□□□□□ -1.01
SPG7-221ENST00000569720 DPH3P1Q9H4G8 78 aa8.73□□□□□ -1.01
SPG7-221ENST00000569720 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
SPG7-221ENST00000569720 A0A1B0GXF2 115 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms