RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 GATD1Q8NB37 220 aa8.88□□□□□ -0.99
CNEP1R1-211ENST00000569647 RPS10P5Q9NQ39 176 aa8.88□□□□□ -0.99
CNEP1R1-211ENST00000569647 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
CNEP1R1-211ENST00000569647 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAGE12JA6NER3 117 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 CAMPP49913 170 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAGE1Q13065 139 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAGE4Q13068 117 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAGE5Q13069 117 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 ESRGQ1W209 222 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAGE13Q4V321 117 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 NEGR1Q7Z3B1 354 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 SH2D6Q7Z4S9 175 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 BTF3L4Q96K17 158 aa8.87□□□□□ -0.99
CNEP1R1-211ENST00000569647 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 H7C1H1 209 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 S100A8P05109 93 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 RAB4AP20338 218 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 AMN1Q8IY45 258 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 LINC00588Q9Y4M8 146 aa8.86□□□□□ -0.99
CNEP1R1-211ENST00000569647 TRBV7-3A0A075B6L6 115 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 TRAV26-2A0A0B4J265 109 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 CCL18P55774 89 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 TIRAPP58753 221 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 UBE2D3P61077 147 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 UBE2D2P62837 147 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 ATP6V0E2Q8NHE4 81 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 FRZBQ92765 325 aa8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
CNEP1R1-211ENST00000569647 M0R2N4 97 aa8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 S100PP25815 95 aa8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 URGCP-MRPS24S4R325 110 aa8.84□□□□□ -0.99
CNEP1R1-211ENST00000569647 GAS8-AS1O95177 125 aa8.83□□□□□ -1
CNEP1R1-211ENST00000569647 MRAP2Q96G30 205 aa8.83□□□□□ -1
CNEP1R1-211ENST00000569647 UPK3BQ9BT76 320 aa8.83□□□□□ -1
CNEP1R1-211ENST00000569647 GTSF1LQ9H1H1 148 aa8.83□□□□□ -1
CNEP1R1-211ENST00000569647 NIT2Q9NQR4 276 aa8.83□□□□□ -1
CNEP1R1-211ENST00000569647 HERC2O95714 4834 aa8.82□□□□□ -1
CNEP1R1-211ENST00000569647 IGLV2-18A0A075B6J9 118 aa8.82□□□□□ -1
CNEP1R1-211ENST00000569647 MRPL51Q4U2R6 128 aaKnown RBP8.82□□□□□ -1
CNEP1R1-211ENST00000569647 LINC00336Q6ZUF6 198 aa8.82□□□□□ -1
CNEP1R1-211ENST00000569647 RPL39LQ96EH5 51 aaKnown RBP8.82□□□□□ -1
CNEP1R1-211ENST00000569647 TNFRSF18Q9Y5U5 241 aa8.82□□□□□ -1
CNEP1R1-211ENST00000569647 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 RTL8CO15255 209 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 NCR2O95944 276 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 Q6ZR54 194 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 TMEM136Q6ZRR5 245 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 YPEL4Q96NS1 127 aa8.81□□□□□ -1
CNEP1R1-211ENST00000569647 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 SMKR1H3BMG3 65 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
CNEP1R1-211ENST00000569647 ELOBQ15370 118 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 OR10J3Q5JRS4 329 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 LELP1Q5T871 98 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
CNEP1R1-211ENST00000569647 NRACQ8N912 160 aa8.8□□□□□ -1
CNEP1R1-211ENST00000569647 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
CNEP1R1-211ENST00000569647 TGIF2-C20orf24A0A0A6YYL0 155 aa8.79□□□□□ -1
CNEP1R1-211ENST00000569647 IGHV3-38A0A0C4DH36 116 aa8.79□□□□□ -1
CNEP1R1-211ENST00000569647 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 A0A1B0GVY2 172 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 D6R8Y8 96 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 CKS2P33552 79 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 COX19Q49B96 90 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
CNEP1R1-211ENST00000569647 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 PRSS29PA6NIE9 313 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 PPP1R17O96001 155 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 PPBPP02775 128 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 Q9H8V8 135 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 ST20Q9HBF5 79 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 LRP1BQ9NZR2 4599 aa8.77□□□□□ -1.01
CNEP1R1-211ENST00000569647 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 SIVA1O15304 175 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 NPYP01303 97 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 HLA-DQA1P01909 254 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 POLR2KP53803 58 aaKnown RBP8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 TMEM97Q5BJF2 176 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 ORMDL3Q8N138 153 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 SMCO4Q9NRQ5 59 aa8.76□□□□□ -1.01
CNEP1R1-211ENST00000569647 HSPG2P98160 4391 aa8.75□□□□□ -1.01
CNEP1R1-211ENST00000569647 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms