RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 DLEC1Q9Y238 1755 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 FANCAO15360 1455 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 PRDM15P57071 1507 aaPredicted RBP1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 CDK13Q14004 1512 aaKnown RBP1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 MYH8P13535 1937 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 TRGV2A0A075B6R0 118 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 TRBV10-1A0A0K0K1A3 114 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 DNAL4O96015 105 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 CBLN1P23435 193 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 C12orf73Q69YU5 71 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 SBSPONQ8IVN8 264 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 S100ZQ8WXG8 99 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 DMAC1Q96GE9 116 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 ATG5Q9H1Y0 275 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 Q9H521 79 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 LINC00474Q9P2X8 69 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 AP4S1Q9Y587 144 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 ABCA3Q99758 1704 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 ADGRL2O95490 1459 aa1.31□□□□□ -2.2
SHCBP1-206ENST00000567698 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 TCRBV3S1A0A5B6 114 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 RBAKDNA6NC62 111 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 IL9P15248 144 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 COL5A1-AS1Q5SY13 56 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 C5orf38Q86SI9 138 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 MRPL35Q9NZE8 188 aaKnown RBP1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 IQSEC2Q5JU85 1478 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 DNMBPQ6XZF7 1577 aa1.3□□□□□ -2.2
SHCBP1-206ENST00000567698 PHIPQ8WWQ0 1821 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 NBDYA0A0U1RRE5 68 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 CLPSL1A2RUU4 121 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 TMEM262E9PQX1 116 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 CCKP06307 115 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 C9orf62Q8N4C0 152 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 DEFB119Q8N690 84 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 TMEM14CQ9P0S9 112 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 C10orf71Q711Q0 1435 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 NKTRP30414 1462 aaKnown RBP1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 MAGI2Q86UL8 1455 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 CDK12Q9NYV4 1490 aaPredicted RBP1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 ABCC3O15438 1527 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 RREB1Q92766 1687 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 NWD2Q9ULI1 1742 aa1.29□□□□□ -2.2
SHCBP1-206ENST00000567698 TET1Q8NFU7 2136 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 LOC101927531A0A1B0GV80 90 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 FAM24AA6NFZ4 105 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 HCG22E2RYF7 251 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 MT-ATP8P03928 68 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 UNQ6190/PRO20217Q6UXQ8 127 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 DEFB132Q7Z7B7 95 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 NDUFA11Q86Y39 141 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 AQP10Q96PS8 301 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 S100A13Q99584 98 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 ARHGAP5Q13017 1502 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 TET3O43151 1660 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 NRXN2Q9P2S2 1712 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 ARFGEF1Q9Y6D6 1849 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 PLXNA1Q9UIW2 1896 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 ZGRF1Q86YA3 2104 aa1.28□□□□□ -2.2
SHCBP1-206ENST00000567698 CHD1O14646 1710 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 TNS1Q9HBL0 1735 aaKnown RBP1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 E9PCH4 1651 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 EPRSP07814 1512 aaKnown RBP1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 ZMYM4Q5VZL5 1548 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 SYCP2Q9BX26 1530 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 ABCC5O15440 1437 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 TRBV10-3A0A0K0K1G6 114 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 H3BQF6 201 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 LINC00032P0C843 101 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 UBE2D1P51668 147 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 RPL37AP61513 92 aaKnown RBP1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 HMGN3Q15651 99 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 RPL7L1Q6DKI1 246 aaKnown RBP1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 COMMD6Q7Z4G1 85 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 AMELYQ99218 206 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 LINC00312Q9Y6C7 94 aa1.27□□□□□ -2.21
SHCBP1-206ENST00000567698 AFDNP55196 1824 aaKnown RBP1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 KIAA1551Q9HCM1 1747 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 TOPAZ1Q8N9V7 1692 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 TMEM131LA2VDJ0 1609 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 CLASP1Q7Z460 1538 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 UGGT2Q9NYU1 1516 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 TEX14Q8IWB6 1497 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 PXDNQ92626 1479 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 NRXN1Q9ULB1 1477 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 HFM1A2PYH4 1435 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 PLIN4Q96Q06 1357 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 UBE2L5PA0A1B0GUS4 154 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 A6NIN4 97 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 HIGD1CA8MV81 97 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 SNCAP37840 140 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 FXYD4P59646 89 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 UBE2L3P68036 154 aaKnown RBP1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 CCL8P80075 99 aa1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 DCDP81605 110 aaKnown RBP1.26□□□□□ -2.21
SHCBP1-206ENST00000567698 GDF5OSQ5U4N7 250 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms