RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FAM213BQ8TBF2 198 aa9.75□□□□□ -0.85
RNF40-209ENST00000566703 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 OXTP01178 125 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
RNF40-209ENST00000566703 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
RNF40-209ENST00000566703 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 A0A0D9SG52 128 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 HMSDA8MTL9 139 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 F5H697 171 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 SMIM17P0DL12 118 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 EIF5AP63241 154 aaKnown RBP9.73□□□□□ -0.85
RNF40-209ENST00000566703 NTM-AS1Q6ZSK4 140 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 KIF25-AS1Q9Y6Z4 181 aa9.73□□□□□ -0.85
RNF40-209ENST00000566703 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
RNF40-209ENST00000566703 H2AFB1P0C5Y9 115 aa9.72□□□□□ -0.85
RNF40-209ENST00000566703 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
RNF40-209ENST00000566703 RBX1P62877 108 aa9.71□□□□□ -0.86
RNF40-209ENST00000566703 C9orf163Q8N9P6 203 aa9.71□□□□□ -0.86
RNF40-209ENST00000566703 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
RNF40-209ENST00000566703 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
RNF40-209ENST00000566703 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 SMLR1H3BR10 107 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 C11orf52Q96A22 123 aa9.7□□□□□ -0.86
RNF40-209ENST00000566703 A0A1B0GV50 99 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 KANTRA0A1W2PQU2 76 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 H7C1H1 209 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 BCL2L11O43521 198 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 PRSS1P07477 247 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
RNF40-209ENST00000566703 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
RNF40-209ENST00000566703 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 CLRN3Q8NCR9 226 aa9.69□□□□□ -0.86
RNF40-209ENST00000566703 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 IGHV1-24A0A0C4DH33 117 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 M0QY20 66 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 HLA-DQA1P01909 254 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 SSTP61278 116 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 MANBALQ9NQG1 85 aa9.68□□□□□ -0.86
RNF40-209ENST00000566703 IGLC6P0CF74 106 aa9.67□□□□□ -0.86
RNF40-209ENST00000566703 CACNG7P62955 275 aa9.67□□□□□ -0.86
RNF40-209ENST00000566703 GAGE6Q13070 117 aa9.67□□□□□ -0.86
RNF40-209ENST00000566703 FER1L6-AS1Q8NA97 138 aa9.67□□□□□ -0.86
RNF40-209ENST00000566703 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
RNF40-209ENST00000566703 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
RNF40-209ENST00000566703 A0A1B0GUV1 79 aa9.66□□□□□ -0.86
RNF40-209ENST00000566703 F2Z2F3 143 aa9.66□□□□□ -0.86
RNF40-209ENST00000566703 P01737 135 aa9.66□□□□□ -0.86
RNF40-209ENST00000566703 RAB5CP51148 216 aa9.66□□□□□ -0.86
RNF40-209ENST00000566703 RPL37AP61513 92 aaKnown RBP9.66□□□□□ -0.86
RNF40-209ENST00000566703 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 TEX46H3BTG2 121 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 GZMBP10144 247 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 CCL20P78556 96 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 REG3AQ06141 175 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 GNG13Q9P2W3 67 aa9.65□□□□□ -0.86
RNF40-209ENST00000566703 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 EIF5AL1Q6IS14 154 aaKnown RBP9.64□□□□□ -0.87
RNF40-209ENST00000566703 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 RASL11AQ6T310 242 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
RNF40-209ENST00000566703 MGPP08493 103 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 CNBPP62633 177 aaKnown RBP9.63□□□□□ -0.87
RNF40-209ENST00000566703 CLPSL2Q6UWE3 100 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 C20orf203Q8NBC4 194 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 TMEM243Q9BU79 118 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 NIT2Q9NQR4 276 aa9.63□□□□□ -0.87
RNF40-209ENST00000566703 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
RNF40-209ENST00000566703 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 PDE6DO43924 150 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 IFNA1P01562 189 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 GNG4P50150 75 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 NKX2-5P52952 324 aaPredicted RBP9.61□□□□□ -0.87
RNF40-209ENST00000566703 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
RNF40-209ENST00000566703 C9orf62Q8N4C0 152 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
RNF40-209ENST00000566703 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
RNF40-209ENST00000566703 NTF3P20783 257 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 MEF2BQ02080 365 aaPredicted RBP9.6□□□□□ -0.87
RNF40-209ENST00000566703 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
RNF40-209ENST00000566703 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms