RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 UBE2WQ96B02 151 aa1.59□□□□□ -2.15
PALB2-204ENST00000566069 LINC01600Q96MT4 127 aa1.59□□□□□ -2.15
PALB2-204ENST00000566069 ANKRD36A6QL64 1941 aa1.59□□□□□ -2.15
PALB2-204ENST00000566069 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
PALB2-204ENST00000566069 NWD2Q9ULI1 1742 aa1.59□□□□□ -2.16
PALB2-204ENST00000566069 MYO9BQ13459 2157 aa1.59□□□□□ -2.16
PALB2-204ENST00000566069 AGLP35573 1532 aa1.59□□□□□ -2.16
PALB2-204ENST00000566069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.59□□□□□ -2.16
PALB2-204ENST00000566069 RGPD2P0DJD1 1756 aa1.59□□□□□ -2.16
PALB2-204ENST00000566069 MROH2AA6NES4 1674 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 LCTP09848 1927 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 PXDNLA1KZ92 1463 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 COL5A3P25940 1745 aaPredicted RBP1.58□□□□□ -2.16
PALB2-204ENST00000566069 NUP188Q5SRE5 1749 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 DIDO1Q9BTC0 2240 aaKnown RBP1.58□□□□□ -2.16
PALB2-204ENST00000566069 SCN3AQ9NY46 2000 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 MAST2Q6P0Q8 1798 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 PIGBOS1A0A0B4J2F0 54 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 C19orf71A6NCJ1 209 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 H7BZZ5 65 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 TFF1P04155 84 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 FCER1GP30273 86 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 SPINT3P49223 89 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 TSPEAR-AS2P59090 65 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.58□□□□□ -2.16
PALB2-204ENST00000566069 MIR17HGQ75NE6 70 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 C20orf197Q8N268 126 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 PLA2G12AQ9BZM1 189 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 BPESC1Q9GZL8 116 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 PROK2Q9HC23 129 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 DYNLRB1Q9NP97 96 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 MRPL35Q9NZE8 188 aaKnown RBP1.58□□□□□ -2.16
PALB2-204ENST00000566069 NDUFA12Q9UI09 145 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 ZNF236Q9UL36 1845 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 ARHGEF5Q12774 1597 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 TIAM1Q13009 1591 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 NWD1Q149M9 1564 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 SPTBP11277 2137 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 MYO7AQ13402 2215 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 USP54Q70EL1 1684 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 THSD7AQ9UPZ6 1657 aa1.58□□□□□ -2.16
PALB2-204ENST00000566069 RGPD1P0DJD0 1748 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 MED13Q9UHV7 2174 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 PLXNA1Q9UIW2 1896 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IGLV3-9A0A075B6K5 115 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TRAV13-2A0A0B4J235 113 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TRAV1-2A0A0B4J238 106 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TRAV3A0A0B4J244 114 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TRBV10-2A0A0K0K1G8 114 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TEX49A0A1B0GTD5 131 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 A0A1B0GW54 56 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 A6NED7 52 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 C17orf51A8MQB3 221 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 HCG22E2RYF7 251 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 E7EQL1 145 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IGKV1-39P01597 117 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IGHV1-46P01743 117 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IGKV1D-39P04432 117 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 SAA1P0DJI8 122 aaPredicted RBP1.57□□□□□ -2.16
PALB2-204ENST00000566069 ZNF22P17026 224 aaPredicted RBP1.57□□□□□ -2.16
PALB2-204ENST00000566069 S100A3P33764 101 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 FXYD7P58549 80 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 UBE2D3P61077 147 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 UBE2D2P62837 147 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 ZNF117Q03924 483 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 ESRGQ1W209 222 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 FAM229BQ4G0N7 80 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 MRPL51Q4U2R6 128 aaKnown RBP1.57□□□□□ -2.16
PALB2-204ENST00000566069 GDF5OSQ5U4N7 250 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 C2orf82Q6UX34 121 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 RPRMLQ8N4K4 120 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 ZNF563Q8TA94 476 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 DYNLRB2Q8TF09 96 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 IFI27L1Q96BM0 104 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 TMEM141Q96I45 108 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 SCGB3A1Q96QR1 104 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 PHLDA3Q9Y5J5 127 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 PLXNB3Q9ULL4 1909 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 LTBP4Q8N2S1 1624 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 PTPN23Q9H3S7 1636 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 CLTCQ00610 1675 aaKnown RBP1.57□□□□□ -2.16
PALB2-204ENST00000566069 CFAP43Q8NDM7 1665 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 PEAK1Q9H792 1746 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 CRYBG1Q9Y4K1 1723 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 RGPD8O14715 1765 aaPredicted RBP1.57□□□□□ -2.16
PALB2-204ENST00000566069 RGPD5Q99666 1765 aa1.57□□□□□ -2.16
PALB2-204ENST00000566069 BTAF1O14981 1849 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 PLXNA2O75051 1894 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 NYNRINQ9P2P1 1898 aaKnown RBP1.56□□□□□ -2.16
PALB2-204ENST00000566069 NFAT5O94916 1531 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 NEXMIFQ5QGS0 1516 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 ADGRB1O14514 1584 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 MROH2BQ7Z745 1585 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 MYO3AQ8NEV4 1616 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 MYOFQ9NZM1 2061 aa1.56□□□□□ -2.16
PALB2-204ENST00000566069 HEATR5BQ9P2D3 2071 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms