RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 INAFM2P0DMQ5 153 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 NTF3P20783 257 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 ADIRFQ15847 76 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 C10orf126Q8N4M7 172 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 ATP6V0E2Q8NHE4 81 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 ISOC2Q96AB3 205 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
SPSB3-207ENST00000565550 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 F5H697 171 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 GCSHP23434 173 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 TIRAPP58753 221 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 CACNG7P62955 275 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 NAT8Q9UHE5 227 aa12.7□□□□□ -0.38
SPSB3-207ENST00000565550 F2Z2F3 143 aa12.69□□□□□ -0.38
SPSB3-207ENST00000565550 RAB4BP61018 213 aa12.69□□□□□ -0.38
SPSB3-207ENST00000565550 FAM74A3Q4VXF1 159 aa12.69□□□□□ -0.38
SPSB3-207ENST00000565550 SLC7A5P1Q8MH63 180 aa12.69□□□□□ -0.38
SPSB3-207ENST00000565550 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 FOXA3P55318 350 aaPredicted RBP12.68□□□□□ -0.38
SPSB3-207ENST00000565550 Q5VSD8 79 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 FRZBQ92765 325 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 OSTCQ9NRP0 149 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 V9GYV3 84 aa12.68□□□□□ -0.38
SPSB3-207ENST00000565550 HERC1Q15751 4861 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 TMEM218A2RU14 115 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 PSCAO43653 123 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 TWIST1Q15672 202 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 LINC01556Q5JQF7 62 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 Q8N3U1 123 aa12.67□□□□□ -0.38
SPSB3-207ENST00000565550 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 A8MWL6 223 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
SPSB3-207ENST00000565550 CT83Q5H943 113 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 CNFNQ9BYD5 112 aa12.66□□□□□ -0.38
SPSB3-207ENST00000565550 TRAV8-6A0A0B4J262 113 aa12.65□□□□□ -0.38
SPSB3-207ENST00000565550 UBE2D3P61077 147 aa12.65□□□□□ -0.38
SPSB3-207ENST00000565550 UBE2D2P62837 147 aa12.65□□□□□ -0.38
SPSB3-207ENST00000565550 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 TRGC1P0CF51 173 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
SPSB3-207ENST00000565550 LELP1Q5T871 98 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
SPSB3-207ENST00000565550 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 Q9HAA7 133 aa12.64□□□□□ -0.39
SPSB3-207ENST00000565550 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 IGHV3-30P01768 117 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 IGHV3-33P01772 117 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 IGHV3-30-3P0DP02 117 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 IGHV3-30-5P0DP03 117 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 HAMPP81172 84 aa12.63□□□□□ -0.39
SPSB3-207ENST00000565550 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
SPSB3-207ENST00000565550 F8W036 122 aa12.62□□□□□ -0.39
SPSB3-207ENST00000565550 M0QY20 66 aa12.62□□□□□ -0.39
SPSB3-207ENST00000565550 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
SPSB3-207ENST00000565550 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
SPSB3-207ENST00000565550 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
SPSB3-207ENST00000565550 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
SPSB3-207ENST00000565550 C10orf91Q5T1B1 145 aa12.6□□□□□ -0.39
SPSB3-207ENST00000565550 Q8N814 137 aa12.6□□□□□ -0.39
SPSB3-207ENST00000565550 NUP35Q8NFH5 326 aa12.6□□□□□ -0.39
SPSB3-207ENST00000565550 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
SPSB3-207ENST00000565550 TMEM70Q9BUB7 260 aa12.59□□□□□ -0.39
SPSB3-207ENST00000565550 FAM229AH3BQW9 127 aa12.58□□□□□ -0.4
SPSB3-207ENST00000565550 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
SPSB3-207ENST00000565550 GATD1Q8NB37 220 aa12.58□□□□□ -0.4
SPSB3-207ENST00000565550 CARHSP1Q9Y2V2 147 aaKnown RBP12.58□□□□□ -0.4
SPSB3-207ENST00000565550 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
SPSB3-207ENST00000565550 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
SPSB3-207ENST00000565550 NTM-AS1Q6ZSK4 140 aa12.57□□□□□ -0.4
SPSB3-207ENST00000565550 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
SPSB3-207ENST00000565550 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
SPSB3-207ENST00000565550 VPS13BQ7Z7G8 4022 aa12.56□□□□□ -0.4
SPSB3-207ENST00000565550 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
SPSB3-207ENST00000565550 FAM231BA6NCW3 169 aa12.56□□□□□ -0.4
SPSB3-207ENST00000565550 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
SPSB3-207ENST00000565550 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
SPSB3-207ENST00000565550 NAT8BQ9UHF3 227 aa12.56□□□□□ -0.4
SPSB3-207ENST00000565550 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
SPSB3-207ENST00000565550 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
SPSB3-207ENST00000565550 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
SPSB3-207ENST00000565550 A0A087WWC5 75 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 H7C1H1 209 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 WFDC2Q14508 124 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 LAGE3Q14657 143 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
SPSB3-207ENST00000565550 NIT1Q86X76 327 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms