RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 IGHV3-30-3P0DP02 117 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 LAGE3Q14657 143 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 TMEM241Q24JQ0 296 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
COMMD4-212ENST00000565517 C9JQL5 133 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 MGPP08493 103 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 TWIST1Q15672 202 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 TMEM97Q5BJF2 176 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
COMMD4-212ENST00000565517 NIT1Q86X76 327 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 GFRA4Q9GZZ7 299 aa10.38□□□□□ -0.75
COMMD4-212ENST00000565517 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
COMMD4-212ENST00000565517 TRBV6-8A0A0A6YYG3 113 aa10.37□□□□□ -0.75
COMMD4-212ENST00000565517 FAM231BA6NCW3 169 aa10.37□□□□□ -0.75
COMMD4-212ENST00000565517 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
COMMD4-212ENST00000565517 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
COMMD4-212ENST00000565517 TSKUQ8WUA8 353 aa10.37□□□□□ -0.75
COMMD4-212ENST00000565517 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
COMMD4-212ENST00000565517 EREGO14944 169 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 SPATA12Q7Z6I5 190 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 ISOC2Q96AB3 205 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 NAT8Q9UHE5 227 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
COMMD4-212ENST00000565517 TRAV8-3A0A0A6YYJ7 113 aa10.35□□□□□ -0.75
COMMD4-212ENST00000565517 RPL23P62829 140 aaKnown RBP10.35□□□□□ -0.75
COMMD4-212ENST00000565517 SMIM15Q7Z3B0 74 aa10.35□□□□□ -0.75
COMMD4-212ENST00000565517 FRZBQ92765 325 aa10.35□□□□□ -0.75
COMMD4-212ENST00000565517 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
COMMD4-212ENST00000565517 NIT2Q9NQR4 276 aa10.35□□□□□ -0.75
COMMD4-212ENST00000565517 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 RAB14P61106 215 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 PKIAP61925 76 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 Q8N3U1 123 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 BORCS7Q96B45 105 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 V9GYV3 84 aa10.34□□□□□ -0.75
COMMD4-212ENST00000565517 A0A087WTM6 91 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 A0A087WX48 190 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 ELOBQ15370 118 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 KCNIP4Q6PIL6 250 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 Q9HAA7 133 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 DNAH11Q96DT5 4516 aa10.33□□□□□ -0.76
COMMD4-212ENST00000565517 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
COMMD4-212ENST00000565517 PSCAO43653 123 aa10.32□□□□□ -0.76
COMMD4-212ENST00000565517 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
COMMD4-212ENST00000565517 ADIRFQ15847 76 aa10.32□□□□□ -0.76
COMMD4-212ENST00000565517 NTM-AS1Q6ZSK4 140 aa10.32□□□□□ -0.76
COMMD4-212ENST00000565517 GATD1Q8NB37 220 aa10.31□□□□□ -0.76
COMMD4-212ENST00000565517 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 CDPF1Q6NVV7 123 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
COMMD4-212ENST00000565517 IGHV1-24A0A0C4DH33 117 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 RMI2Q96E14 147 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 NAT8BQ9UHF3 227 aa10.29□□□□□ -0.76
COMMD4-212ENST00000565517 Q0VG73 95 aa10.28□□□□□ -0.76
COMMD4-212ENST00000565517 RIGQ13278 110 aa10.28□□□□□ -0.76
COMMD4-212ENST00000565517 CLLU1Q5K131 121 aa10.28□□□□□ -0.76
COMMD4-212ENST00000565517 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
COMMD4-212ENST00000565517 TRAV26-2A0A0B4J265 109 aa10.27□□□□□ -0.77
COMMD4-212ENST00000565517 SMIM27A0A1W2PRY6 76 aa10.27□□□□□ -0.77
COMMD4-212ENST00000565517 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
COMMD4-212ENST00000565517 ATRAIDQ6UW56 229 aa10.27□□□□□ -0.77
COMMD4-212ENST00000565517 COTL1Q14019 142 aa10.26□□□□□ -0.77
COMMD4-212ENST00000565517 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
COMMD4-212ENST00000565517 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
COMMD4-212ENST00000565517 CDK2AP2O75956 126 aa10.25□□□□□ -0.77
COMMD4-212ENST00000565517 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
COMMD4-212ENST00000565517 RPL39LQ96EH5 51 aaKnown RBP10.25□□□□□ -0.77
COMMD4-212ENST00000565517 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
COMMD4-212ENST00000565517 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 A0A1B0GW15 77 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 RAB4AP20338 218 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 RBX1P62877 108 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 IFITM2Q01629 132 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 GAGE6Q13070 117 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 Q8N814 137 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 Q8N976 141 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
COMMD4-212ENST00000565517 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 RNF185Q96GF1 192 aa10.24□□□□□ -0.77
COMMD4-212ENST00000565517 IGKV2D-24A0A075B6R9 120 aa10.23□□□□□ -0.77
COMMD4-212ENST00000565517 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
COMMD4-212ENST00000565517 NCR2O95944 276 aa10.23□□□□□ -0.77
COMMD4-212ENST00000565517 CRPP02741 224 aa10.23□□□□□ -0.77
COMMD4-212ENST00000565517 PNRC1Q12796 327 aaPredicted RBP10.23□□□□□ -0.77
COMMD4-212ENST00000565517 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms