RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 K7EN84 100 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 M0R036 132 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 GATCO43716 136 aaKnown RBP5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 ZNF876PQ49A33 203 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 CT83Q5H943 113 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 SH2D6Q7Z4S9 175 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 C15orf54Q8N8G6 183 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 Q8N976 141 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 OR2D3Q8NGH3 330 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 PHLDA3Q9Y5J5 127 aa5.93□□□□□ -1.46
VPS9D1-205ENST00000565452 TRAV8-6A0A0B4J262 113 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 TRAV4A0A0B4J268 109 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 A8MWV9 139 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 LECT2O14960 151 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 SNAI2O43623 268 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 SFTA3P0C7M3 94 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 RPL23P62829 140 aaKnown RBP5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 WFDC2Q14508 124 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 ZFP82Q8N141 532 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 GFRA4Q9GZZ7 299 aa5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
VPS9D1-205ENST00000565452 TMEM218A2RU14 115 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 PPP1R2P9O14990 202 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 CACNG7P62955 275 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 ZFP2Q6ZN57 461 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 OR4C5Q8NGB2 326 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 ISOC2Q96AB3 205 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 SFRP2Q96HF1 295 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 SEC11CQ9BY50 192 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 RNASE7Q9H1E1 156 aaKnown RBP5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
VPS9D1-205ENST00000565452 TMSB15BA0A087X1C1 80 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 A0A0U1RQV1 116 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 H3BVH4 76 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 IGLC6P0CF74 106 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 TIRAPP58753 221 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 RPL19P84098 196 aaKnown RBP5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 LAGE3Q14657 143 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 ADIRFQ15847 76 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 COMMD7Q86VX2 200 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 TSKUQ8WUA8 353 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 MRPL16Q9NX20 251 aaKnown RBP5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 COX11Q9Y6N1 276 aa5.9□□□□□ -1.46
VPS9D1-205ENST00000565452 F8W036 122 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 RHODO00212 210 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 NDUFA5Q16718 116 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 SPANXN1Q5VSR9 72 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 CFAP126Q5VTH2 177 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 DMRTA1Q5VZB9 504 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 BAALCQ8WXS3 180 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 ANAPC16Q96DE5 110 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 CNFNQ9BYD5 112 aa5.89□□□□□ -1.47
VPS9D1-205ENST00000565452 TRBV6-4A0A1B0GX49 114 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 IGHV3-30P01768 117 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 IGHV3-33P01772 117 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 MT-ND4LP03901 98 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 TRGC1P0CF51 173 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 IGHV3-30-3P0DP02 117 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 IGHV3-30-5P0DP03 117 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 CTRLP40313 264 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 OR10J3Q5JRS4 329 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 C10orf91Q5T1B1 145 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 LELP1Q5T871 98 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 LYZL1Q6UWQ5 148 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 BORCS7Q96B45 105 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 V9GYV3 84 aa5.88□□□□□ -1.47
VPS9D1-205ENST00000565452 M0R381 172 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 NTF3P20783 257 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 SMIM15Q7Z3B0 74 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 ATP6V0E2Q8NHE4 81 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 CTDSP1Q9GZU7 261 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 NAT8BQ9UHF3 227 aa5.87□□□□□ -1.47
VPS9D1-205ENST00000565452 A0A1B0GUT8 65 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 A0A1B0GW15 77 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 SMIM27A0A1W2PRY6 76 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 HIGD1CA8MV81 97 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 GZMBP10144 247 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 GATA1P15976 413 aaPredicted RBP5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 RAB4BP61018 213 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 GTSF1Q8WW33 167 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 LINC01600Q96MT4 127 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 AP1S3Q96PC3 154 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 IMMP2LQ96T52 175 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 PRADC1Q9BSG0 188 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 CARHSP1Q9Y2V2 147 aaKnown RBP5.86□□□□□ -1.47
VPS9D1-205ENST00000565452 S100A8P05109 93 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 RIGQ13278 110 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 RHOHQ15669 191 aa5.85□□□□□ -1.47
VPS9D1-205ENST00000565452 TWIST1Q15672 202 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms