RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	UBE2G1	P62253	170 aa		10.19	□□□□□ -0.78
CLCN7-208	ENST00000564968	SERF2	P84101	59 aa		10.18	□□□□□ -0.78
CLCN7-208	ENST00000564968	GAGE6	Q13070	117 aa		10.18	□□□□□ -0.78
CLCN7-208	ENST00000564968	DGAT2L7P	Q6IED9	249 aa		10.18	□□□□□ -0.78
CLCN7-208	ENST00000564968	KCNRG	Q8N5I3	272 aa		10.18	□□□□□ -0.78
CLCN7-208	ENST00000564968	OR10G8	Q8NGN5	311 aa		10.18	□□□□□ -0.78
CLCN7-208	ENST00000564968	IGLV10-54	A0A075B6I4	117 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	FXYD6-FXYD2	A0A087WZ82	144 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	FAM74A7	A6NL05	159 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	RPL19	P84098	196 aa	Known RBP	10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	ZNF726P1	Q15940	193 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	LINC01559	Q495D7	138 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968		Q6ZRU5	148 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	LINC00269	Q8N2A0	174 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	HIST1H2BA	Q96A08	127 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	TNFSF18	Q9UNG2	199 aa		10.17	□□□□□ -0.78
CLCN7-208	ENST00000564968	MUC21	A0A0G2JKD1	596 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	MUC21	A0A140T8X8	626 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	CTXND1	A0A1B0GTU2	59 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	hDV102S1	A0JD36	115 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	CHTF8	P0CG12	524 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	RAB4B	P61018	213 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	PKIA	P61925	76 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	UQCC3	Q6UW78	93 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	OR10AG1	Q8NH19	301 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	DPH3	Q96FX2	82 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968	FMC1	Q96HJ9	113 aa		10.16	□□□□□ -0.78
CLCN7-208	ENST00000564968		F5H697	171 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	BCL2L11	O43521	198 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	SST	P61278	116 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	RBX1	P62877	108 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	ZNF674	Q2M3X9	581 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	ALKAL2	Q6UX46	152 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	SDIM1	Q6ZPB5	146 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	AQP10	Q96PS8	301 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	ZFP30	Q9Y2G7	519 aa		10.15	□□□□□ -0.78
CLCN7-208	ENST00000564968	KANTR	A0A1W2PQU2	76 aa		10.14	□□□□□ -0.79
CLCN7-208	ENST00000564968	RAB19	A4D1S5	217 aa		10.14	□□□□□ -0.79
CLCN7-208	ENST00000564968	TEX46	H3BTG2	121 aa		10.14	□□□□□ -0.79
CLCN7-208	ENST00000564968	RPL7L1	Q6DKI1	246 aa	Known RBP	10.14	□□□□□ -0.79
CLCN7-208	ENST00000564968	DPH3P1	Q9H4G8	78 aa		10.14	□□□□□ -0.79
CLCN7-208	ENST00000564968	TRBV25-1	A0A075B6N4	114 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	AKR1C3	P42330	323 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	ODF1	Q14990	250 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	KRTAP26-1	Q6PEX3	210 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	NTM-AS1	Q6ZSK4	140 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	DERL1	Q9BUN8	251 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	PRR34	Q9NV39	138 aa		10.13	□□□□□ -0.79
CLCN7-208	ENST00000564968	CST9LP1	Q5W188	147 aa		10.12	□□□□□ -0.79
CLCN7-208	ENST00000564968	PRR27	Q6MZM9	219 aa		10.12	□□□□□ -0.79
CLCN7-208	ENST00000564968	COX8C	Q7Z4L0	72 aa		10.12	□□□□□ -0.79
CLCN7-208	ENST00000564968	ZNF471	Q9BX82	626 aa	Predicted RBP	10.12	□□□□□ -0.79
CLCN7-208	ENST00000564968	NKX6-2	Q9C056	277 aa	Predicted RBP	10.12	□□□□□ -0.79
CLCN7-208	ENST00000564968	IGHV3-64	A0A075B6Q5	118 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968		A0A087WYN8	130 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	MAP1LC3B2	A6NCE7	125 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	PHOX2A	O14813	284 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	LTA	P01374	205 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	H2AFB1	P0C5Y9	115 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	RAB5C	P51148	216 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	REG3A	Q06141	175 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	AKR1C8P	Q5T2L2	129 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	SPANXN1	Q5VSR9	72 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	CLRN3	Q8NCR9	226 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	STOML3	Q8TAV4	291 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	MAP1LC3B	Q9GZQ8	125 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	AP5S1	Q9NUS5	200 aa		10.11	□□□□□ -0.79
CLCN7-208	ENST00000564968	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.1	□□□□□ -0.79
CLCN7-208	ENST00000564968	TRBV6-1	A0A0K0K1D8	114 aa		10.1	□□□□□ -0.79
CLCN7-208	ENST00000564968	CNBP	P62633	177 aa	Known RBP	10.1	□□□□□ -0.79
CLCN7-208	ENST00000564968	CIRBP	Q14011	172 aa	Known RBP	10.1	□□□□□ -0.79
CLCN7-208	ENST00000564968	TMEM97	Q5BJF2	176 aa		10.1	□□□□□ -0.79
CLCN7-208	ENST00000564968	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	SMIM17	P0DL12	118 aa		10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	SPACA4	Q8TDM5	124 aa		10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	C7orf33	Q8WU49	177 aa		10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	VAX2	Q9UIW0	290 aa		10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	KIF25-AS1	Q9Y6Z4	181 aa		10.09	□□□□□ -0.79
CLCN7-208	ENST00000564968	IGHV1-24	A0A0C4DH33	117 aa		10.08	□□□□□ -0.8
CLCN7-208	ENST00000564968	MGP	P08493	103 aa		10.08	□□□□□ -0.8
CLCN7-208	ENST00000564968	AP1S3	Q96PC3	154 aa		10.08	□□□□□ -0.8
CLCN7-208	ENST00000564968	C10orf91	Q5T1B1	145 aa		10.07	□□□□□ -0.8
CLCN7-208	ENST00000564968	RNF185	Q96GF1	192 aa		10.07	□□□□□ -0.8
CLCN7-208	ENST00000564968	SNAI2	O43623	268 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	APOC3	P02656	99 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	SLPI	P03973	132 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	IQCJ	Q1A5X6	159 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	C20orf203	Q8NBC4	194 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	GFRA4	Q9GZZ7	299 aa		10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.06	□□□□□ -0.8
CLCN7-208	ENST00000564968	IGLV4-60	A0A075B6I1	120 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	IGKV2-24	A0A0C4DH68	120 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968		A0A1B0GV50	99 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	SCO2	A0A1W2PP80	73 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	TMEM218	A2RU14	115 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	EIF5A	P63241	154 aa	Known RBP	10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	SVBP	Q8N300	66 aa		10.05	□□□□□ -0.8
CLCN7-208	ENST00000564968	GTSF1	Q8WW33	167 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms