RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 WDR73Q6P4I2 378 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 FAM231DQ6ZW35 169 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
CDH1-206ENST00000564676 DNAH11Q96DT5 4516 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 CTRLP40313 264 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 UBE2D3P61077 147 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 UBE2D2P62837 147 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 TWIST1Q15672 202 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.73□□□□□ -1.33
CDH1-206ENST00000564676 OR10G8Q8NGN5 311 aa6.73□□□□□ -1.33
CDH1-206ENST00000564676 C9JQL5 133 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 H7C1H1 209 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 RAB14P61106 215 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 SRSF3P84103 164 aaKnown RBP6.72□□□□□ -1.33
CDH1-206ENST00000564676 TMEM241Q24JQ0 296 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 C15orf54Q8N8G6 183 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 PGLYRP4Q96LB8 373 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
CDH1-206ENST00000564676 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 CT83Q5H943 113 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 KCNIP4Q6PIL6 250 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
CDH1-206ENST00000564676 SMIM15Q7Z3B0 74 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 BORCS7Q96B45 105 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 CNFNQ9BYD5 112 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 OSTCQ9NRP0 149 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 URGCP-MRPS24S4R325 110 aa6.71□□□□□ -1.34
CDH1-206ENST00000564676 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 M0QY20 66 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 EREGO14944 169 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 RPL23P62829 140 aaKnown RBP6.7□□□□□ -1.34
CDH1-206ENST00000564676 ADIRFQ15847 76 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 SPATA12Q7Z6I5 190 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 DAZ4Q86SG3 579 aaKnown RBP6.7□□□□□ -1.34
CDH1-206ENST00000564676 TSKUQ8WUA8 353 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 DNAJC30Q96LL9 226 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 Q9HAA7 133 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 DAZ3Q9NR90 486 aaKnown RBP6.7□□□□□ -1.34
CDH1-206ENST00000564676 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
CDH1-206ENST00000564676 PKD1P98161 4303 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 A0A087WX48 190 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 TRBV6-8A0A0A6YYG3 113 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 TMEM262E9PQX1 116 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 PSCAO43653 123 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 FOXA3P55318 350 aaPredicted RBP6.69□□□□□ -1.34
CDH1-206ENST00000564676 TMEM97Q5BJF2 176 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 RASL11AQ6T310 242 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 NIT1Q86X76 327 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 ISOC2Q96AB3 205 aa6.69□□□□□ -1.34
CDH1-206ENST00000564676 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 LAGE3Q14657 143 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 GFRA4Q9GZZ7 299 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 V9GYV3 84 aa6.68□□□□□ -1.34
CDH1-206ENST00000564676 TRAV8-3A0A0A6YYJ7 113 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 A0A1B0GUT8 65 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 ELOBQ15370 118 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 TM2D2Q9BX73 214 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 NIT2Q9NQR4 276 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 KLK12Q9UKR0 248 aa6.67□□□□□ -1.34
CDH1-206ENST00000564676 TRBV25-1A0A075B6N4 114 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 A0A087WTM6 91 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 TRAV26-2A0A0B4J265 109 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 PKIAP61925 76 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 RIGQ13278 110 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 GATD1Q8NB37 220 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
CDH1-206ENST00000564676 IGHV1-24A0A0C4DH33 117 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 GAGE6Q13070 117 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 CLLU1Q5K131 121 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 NUP35Q8NFH5 326 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 FRZBQ92765 325 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 UBE2WQ96B02 151 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 RMI2Q96E14 147 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
CDH1-206ENST00000564676 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
CDH1-206ENST00000564676 LRP1BQ9NZR2 4599 aa6.65□□□□□ -1.35
CDH1-206ENST00000564676 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
CDH1-206ENST00000564676 COTL1Q14019 142 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 IQCJQ1A5X6 159 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 ATRAIDQ6UW56 229 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 DEFB104AQ8WTQ1 72 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 RPL39LQ96EH5 51 aaKnown RBP6.64□□□□□ -1.35
CDH1-206ENST00000564676 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms