RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RPP21Q9H633 154 aaKnown RBP12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
SYNGR3-204ENST00000564642 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
SYNGR3-204ENST00000564642 NTF3P20783 257 aa12.3□□□□□ -0.44
SYNGR3-204ENST00000564642 A0A087WX48 190 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 CDPF1Q6NVV7 123 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 NIT1Q86X76 327 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 FAM210AQ96ND0 272 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
SYNGR3-204ENST00000564642 H7C1H1 209 aa12.28□□□□□ -0.44
SYNGR3-204ENST00000564642 TRBV6-8A0A0A6YYG3 113 aa12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 TMEM262E9PQX1 116 aa12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 GATCO43716 136 aaKnown RBP12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 NDUFS6O75380 124 aaKnown RBP12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 TWIST1Q15672 202 aa12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
SYNGR3-204ENST00000564642 HERC1Q15751 4861 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 CTRLP40313 264 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 ELOBQ15370 118 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 SMIM7Q9BQ49 75 aa12.26□□□□□ -0.45
SYNGR3-204ENST00000564642 LRCOL1A6NCL2 159 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 M0QY20 66 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
SYNGR3-204ENST00000564642 A8MWL6 223 aa12.24□□□□□ -0.45
SYNGR3-204ENST00000564642 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
SYNGR3-204ENST00000564642 RMI2Q96E14 147 aa12.24□□□□□ -0.45
SYNGR3-204ENST00000564642 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
SYNGR3-204ENST00000564642 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
SYNGR3-204ENST00000564642 TEX261Q6UWH6 196 aa12.23□□□□□ -0.45
SYNGR3-204ENST00000564642 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
SYNGR3-204ENST00000564642 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
SYNGR3-204ENST00000564642 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
SYNGR3-204ENST00000564642 PKIAP61925 76 aa12.22□□□□□ -0.45
SYNGR3-204ENST00000564642 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
SYNGR3-204ENST00000564642 LINC01551Q86U37 167 aa12.22□□□□□ -0.45
SYNGR3-204ENST00000564642 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
SYNGR3-204ENST00000564642 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
SYNGR3-204ENST00000564642 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
SYNGR3-204ENST00000564642 Q0VG73 95 aa12.21□□□□□ -0.45
SYNGR3-204ENST00000564642 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
SYNGR3-204ENST00000564642 Q8N814 137 aa12.21□□□□□ -0.45
SYNGR3-204ENST00000564642 NIT2Q9NQR4 276 aa12.21□□□□□ -0.45
SYNGR3-204ENST00000564642 LRP1BQ9NZR2 4599 aa12.2□□□□□ -0.46
SYNGR3-204ENST00000564642 CT83Q5H943 113 aa12.2□□□□□ -0.46
SYNGR3-204ENST00000564642 NTN5Q8WTR8 489 aaPredicted RBP12.2□□□□□ -0.46
SYNGR3-204ENST00000564642 BORCS7Q96B45 105 aa12.2□□□□□ -0.46
SYNGR3-204ENST00000564642 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
SYNGR3-204ENST00000564642 IGKV2D-24A0A075B6R9 120 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 IGLV5-52A0A0A0MRZ9 124 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 GCSHP23434 173 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 MPV17L2Q567V2 206 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
SYNGR3-204ENST00000564642 IGHV1-24A0A0C4DH33 117 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 CRPP02741 224 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 PEA15Q15121 130 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 TMEM241Q24JQ0 296 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
SYNGR3-204ENST00000564642 GAGE6Q13070 117 aa12.17□□□□□ -0.46
SYNGR3-204ENST00000564642 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
SYNGR3-204ENST00000564642 ATRAIDQ6UW56 229 aa12.17□□□□□ -0.46
SYNGR3-204ENST00000564642 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
SYNGR3-204ENST00000564642 LECT2O14960 151 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 KRTAP10-1P60331 282 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 Q8N976 141 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 BAALCQ8WXS3 180 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 FRZBQ92765 325 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
SYNGR3-204ENST00000564642 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.46
SYNGR3-204ENST00000564642 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
SYNGR3-204ENST00000564642 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
SYNGR3-204ENST00000564642 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.46
SYNGR3-204ENST00000564642 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 HIGD1CA8MV81 97 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 C9JQL5 133 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 RBX1P62877 108 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 WFDC2Q14508 124 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 DNAH5Q8TE73 4624 aa12.14□□□□□ -0.47
SYNGR3-204ENST00000564642 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 COTL1Q14019 142 aa12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
SYNGR3-204ENST00000564642 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms