RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
CHD9-212ENST00000564641 HES1Q14469 280 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 RRN3P1Q2M238 152 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 TMEM78Q5T7P6 136 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 MIC13Q5XKP0 118 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 RPEQ96AT9 228 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 HSD17B10Q99714 261 aaKnown RBP2.52□□□□□ -2.01
CHD9-212ENST00000564641 CHAC1Q9BUX1 264 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 SLC25A2Q9BXI2 301 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 SPANXDQ9BXN6 97 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 CALYQ9NYX4 217 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 SIGLEC9Q9Y336 463 aa2.52□□□□□ -2.01
CHD9-212ENST00000564641 KIAA1549Q9HCM3 1950 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 IGKV2-28A0A075B6P5 120 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 IGKV1-12A0A0C4DH73 117 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 A0A1B0GXF2 115 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 TCRBV4S1A1TA0A5B7 111 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 GGTLC3B5MD39 225 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
CHD9-212ENST00000564641 J3KT08 172 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 K7ERJ3 54 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 M0R135 149 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 NCR2O95944 276 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 IGKV1D-12P01611 117 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 IGKV2D-28P01615 120 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 CLPSP04118 112 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 SCGB1C2P0DMR2 95 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 LINC00694P0DN24 101 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 DEFA4P12838 97 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 ZNF137PP52743 207 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 ZNF138P52744 262 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 SUB1P53999 127 aaKnown RBP eCLIP2.51□□□□□ -2.01
CHD9-212ENST00000564641 RPL30P62888 115 aaKnown RBP2.51□□□□□ -2.01
CHD9-212ENST00000564641 CACNG7P62955 275 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 ZNF816Q0VGE8 651 aaPredicted RBP2.51□□□□□ -2.01
CHD9-212ENST00000564641 DIAPH2-AS1Q14236 149 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 TBC1D28Q2M2D7 210 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 AMTNQ6UX39 209 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 Q6ZR03 302 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 PCP2Q8IVA1 136 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 OR1L8Q8NGR8 309 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 OR10J6PQ8NGY7 276 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 PIFOQ8TCI5 191 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 CARD19Q96LW7 228 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 IGF2BP2-AS1Q96M15 143 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 C18orf15Q96N68 181 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 SMR3AQ99954 134 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 RASL11BQ9BPW5 248 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 MRPL32Q9BYC8 188 aaKnown RBP2.51□□□□□ -2.01
CHD9-212ENST00000564641 FBXL15Q9H469 300 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 ZNF355PQ9NSJ1 428 aa2.51□□□□□ -2.01
CHD9-212ENST00000564641 RAI1Q7Z5J4 1906 aaPredicted RBP2.5□□□□□ -2.01
CHD9-212ENST00000564641 IGKV1-27A0A075B6S5 117 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 TRBV6-6A0A0A6YYG2 114 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 TRAV8-2A0A0B4J237 113 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 TRAV8-4A0A0B4J246 113 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 IGKV1-6A0A0C4DH72 117 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 LOC107984156A0A0G2JMH3 177 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 C5orf63A6NC05 138 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 HIGD1CA8MV81 97 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 B4DSR2 109 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 C9JAW5 83 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 F5H768 121 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 H3BVH4 76 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 M0R1B8 84 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 LYZL6O75951 148 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 C8orf88P0DMB2 117 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 RPL7P18124 248 aaKnown RBP2.5□□□□□ -2.01
CHD9-212ENST00000564641 CD24P25063 80 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 FGF12P61328 243 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 HSPE1P61604 102 aaKnown RBP2.5□□□□□ -2.01
CHD9-212ENST00000564641 RPS28P62857 69 aaKnown RBP2.5□□□□□ -2.01
CHD9-212ENST00000564641 SPINK9Q5DT21 86 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 CFAP126Q5VTH2 177 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 MIR17HGQ75NE6 70 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 LINC00596Q86U02 117 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 TEN1Q86WV5 123 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 ARL17AQ8IVW1 177 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 C10orf126Q8N4M7 172 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 C3orf56Q8N813 242 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 OR4C13Q8NGP0 309 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 IFI27L1Q96BM0 104 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 TMEM101Q96IK0 257 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 MGST2Q99735 147 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 OR2H1Q9GZK4 316 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 RPP21Q9H633 154 aaKnown RBP2.5□□□□□ -2.01
CHD9-212ENST00000564641 DYNLRB1Q9NP97 96 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 HIGD1AQ9Y241 93 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 KLF12Q9Y4X4 402 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 WNK2Q9Y3S1 2297 aa2.5□□□□□ -2.01
CHD9-212ENST00000564641 NACAE9PAV3 2078 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 ARFGEF3Q5TH69 2177 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 MALRD1Q5VYJ5 2156 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 TRAV4A0A0B4J268 109 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 A0A0J9YW62 118 aa2.49□□□□□ -2.01
CHD9-212ENST00000564641 LOC107984640A0A0U1RRK4 108 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms