RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 NKX2-5P52952 324 aaPredicted RBP6.1□□□□□ -1.43
PTPN9-203ENST00000563835 MPV17L2Q567V2 206 aa6.1□□□□□ -1.43
PTPN9-203ENST00000563835 VAX2Q9UIW0 290 aa6.1□□□□□ -1.43
PTPN9-203ENST00000563835 URGCP-MRPS24S4R325 110 aa6.1□□□□□ -1.43
PTPN9-203ENST00000563835 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 IGKV2D-24A0A075B6R9 120 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 A0A087WX48 190 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 TRBV6-8A0A0A6YYG3 113 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 LYZL1Q6UWQ5 148 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 NTM-AS1Q6ZSK4 140 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 NTN5Q8WTR8 489 aaPredicted RBP6.09□□□□□ -1.43
PTPN9-203ENST00000563835 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 UBE2WQ96B02 151 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.43
PTPN9-203ENST00000563835 SMIM12Q96EX1 92 aa6.09□□□□□ -1.43
PTPN9-203ENST00000563835 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
PTPN9-203ENST00000563835 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
PTPN9-203ENST00000563835 SMIM17P0DL12 118 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 CTRLP40313 264 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
PTPN9-203ENST00000563835 LINC01620Q4KN68 170 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 TOR2AQ5JU69 321 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 Q5VSD8 79 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 C15orf54Q8N8G6 183 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 Q8N976 141 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 DEFB104AQ8WTQ1 72 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 TM2D2Q9BX73 214 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
PTPN9-203ENST00000563835 EPM2AB3EWF7 344 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 M0QY20 66 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 CLPSL2Q6UWE3 100 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 ENHOQ6UWT2 76 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 NUDT10Q8NFP7 164 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 OCC1Q8TAD7 63 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 NUDT11Q96G61 164 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 CHCHD5Q9BSY4 110 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 CHCHD7Q9BUK0 85 aa6.07□□□□□ -1.44
PTPN9-203ENST00000563835 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
PTPN9-203ENST00000563835 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
PTPN9-203ENST00000563835 NTF3P20783 257 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 CEBPGP53567 150 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 CACNG7P62955 275 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 GAGE6Q13070 117 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 KCNIP4Q6PIL6 250 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 ATRAIDQ6UW56 229 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 GTSF1Q8WW33 167 aa6.06□□□□□ -1.44
PTPN9-203ENST00000563835 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 XKRY2A2RUG3 117 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 HLA-DQA1P01909 254 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 CRPP02741 224 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 TAGLN2P37802 199 aaKnown RBP6.05□□□□□ -1.44
PTPN9-203ENST00000563835 LYPD6BQ8NI32 183 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 RMI2Q96E14 147 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 DPH3P1Q9H4G8 78 aa6.05□□□□□ -1.44
PTPN9-203ENST00000563835 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 F2Z2F3 143 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 TMEM250H0YL14 139 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 TRGC1P0CF51 173 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 FOXA3P55318 350 aaPredicted RBP6.04□□□□□ -1.44
PTPN9-203ENST00000563835 RBX1P62877 108 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 BLOC1S1P78537 153 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 ELOBQ15370 118 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 IQCJQ1A5X6 159 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 RASL11AQ6T310 242 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 FRZBQ92765 325 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 BIN3Q9NQY0 253 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
PTPN9-203ENST00000563835 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 IGHV1-24A0A0C4DH33 117 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 H7C1H1 209 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 Q0VG73 95 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 TWIST1Q15672 202 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 Q6ZSA8 131 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 LINC00269Q8N2A0 174 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.03□□□□□ -1.44
PTPN9-203ENST00000563835 GFRA4Q9GZZ7 299 aa6.03□□□□□ -1.44
PTPN9-203ENST00000563835 HERC1Q15751 4861 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 IGLV4-60A0A075B6I1 120 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 GATCO43716 136 aaKnown RBP6.02□□□□□ -1.45
PTPN9-203ENST00000563835 TMEM97Q5BJF2 176 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 GATD1Q8NB37 220 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 C20orf203Q8NBC4 194 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 RPL39LQ96EH5 51 aaKnown RBP6.02□□□□□ -1.45
PTPN9-203ENST00000563835 PGLYRP4Q96LB8 373 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 PRR34Q9NV39 138 aa6.02□□□□□ -1.45
PTPN9-203ENST00000563835 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 USP17L23D6RBM5 183 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 PKIAP61925 76 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 MIAQ16674 131 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 WDR73Q6P4I2 378 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 FAM231DQ6ZW35 169 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms