RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	HMGB3	O15347	200 aa	Known RBP	5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	SIX6	O95475	246 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	GCHFR	P30047	84 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	H2BFS	P57053	126 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	RAB4B	P61018	213 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	LRRC37A5P	Q49AS3	106 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	SCGB1C1	Q8TD33	95 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	CHCHD5	Q9BSY4	110 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	FAT4	Q6V0I7	4981 aa		5.16	□□□□□ -1.58
CKLF-208	ENST00000563092	TRAV8-4	A0A0B4J246	113 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	TRAV34	A0A0B4J273	112 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	MUC21	A0A0G2JKD1	596 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092		P01737	135 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	GZMB	P10144	247 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	CYCS	P99999	105 aa	Known RBP	5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	REG3A	Q06141	175 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	IQCJ	Q1A5X6	159 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	TMEM97	Q5BJF2	176 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	CLPSL2	Q6UWE3	100 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	ZFP82	Q8N141	532 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	PPP1R1C	Q8WVI7	109 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	RAB24	Q969Q5	203 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	DPH3	Q96FX2	82 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	PHLDA3	Q9Y5J5	127 aa		5.15	□□□□□ -1.59
CKLF-208	ENST00000563092	IGLV10-54	A0A075B6I4	117 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092		A0A1B0GUV1	79 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092		A0A1W2PRE2	83 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	GRIFIN	A4D1Z8	144 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092		M0R381	172 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	SH2D1A	O60880	128 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	NDUFS6	O75380	124 aa	Known RBP	5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	TPT1	P13693	172 aa	Known RBP	5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	RPL12	P30050	165 aa	Known RBP	5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	CDC34	P49427	236 aa	Predicted RBP	5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	COX6A2	Q02221	97 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	ZNF674	Q2M3X9	581 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092		Q86TA4	180 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	C15orf56	Q8N910	161 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	C20orf203	Q8NBC4	194 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	TMEM167B	Q9NRX6	74 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	AP5S1	Q9NUS5	200 aa		5.14	□□□□□ -1.59
CKLF-208	ENST00000563092	TRBV6-1	A0A0K0K1D8	114 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092		M0R036	132 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	MPC2	O95563	127 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	GAGE6	Q13070	117 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	FAM162B	Q5T6X4	162 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	PRSS3P2	Q8NHM4	247 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	GTSF1	Q8WW33	167 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	SMIM3	Q9BZL3	60 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	GFRA4	Q9GZZ7	299 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	ZFP30	Q9Y2G7	519 aa		5.13	□□□□□ -1.59
CKLF-208	ENST00000563092	FAM240B	A0A1B0GVZ2	78 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	CXorf1	O96002	111 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	CXCL1	P09341	107 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	RPS10	P46783	165 aa	Known RBP	5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	MAJIN	Q3KP22	176 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	STPG4	Q8N801	248 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	PSMG3	Q9BT73	122 aa	Predicted RBP	5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	DERL1	Q9BUN8	251 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	CCDC32	Q9BV29	185 aa		5.12	□□□□□ -1.59
CKLF-208	ENST00000563092	IGLV4-60	A0A075B6I1	120 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	TRBV25-1	A0A075B6N4	114 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	CCDC160	A6NGH7	325 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	PEX7	O00628	323 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	PET100	P0DJ07	73 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092		Q6ZRP5	223 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	OR10AG1	Q8NH19	301 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092	HIST1H2BA	Q96A08	127 aa		5.11	□□□□□ -1.59
CKLF-208	ENST00000563092		A0A096LNI7	61 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	IGHV1-24	A0A0C4DH33	117 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	SNAI2	O43623	268 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	LTA	P01374	205 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	MB	P02144	154 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	ATP6V0C	P27449	155 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	SERF2	P84101	59 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	ZNF56	Q15929	161 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	ANKRD39	Q53RE8	183 aa		5.1	□□□□□ -1.59
CKLF-208	ENST00000563092	TMSB15B	A0A087X1C1	80 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	IGKV2-24	A0A0C4DH68	120 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	FAM74A7	A6NL05	159 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	OR5AL1	P0C617	328 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	ZNF726P1	Q15940	193 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	CFAP161	Q6P656	301 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	LYPD6B	Q8NI32	183 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	FMC1	Q96HJ9	113 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	AQP10	Q96PS8	301 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	NKX6-2	Q9C056	277 aa	Predicted RBP	5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	MED28	Q9H204	178 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	LINC00474	Q9P2X8	69 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	TNFSF18	Q9UNG2	199 aa		5.09	□□□□□ -1.59
CKLF-208	ENST00000563092	hCG_2014768	A0A024R1R8	64 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092		A0A0U1RQV1	116 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	FAM231B	A6NCW3	169 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092		H7C1H1	209 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092		M0QY20	66 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	IFNA7	P01567	189 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms