RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 SS18L2Q9UHA2 77 aa4.08□□□□□ -1.76
AC055874.1-201ENST00000561458 PYGO1Q9Y3Y4 419 aa4.08□□□□□ -1.76
AC055874.1-201ENST00000561458 TRAV8-4A0A0B4J246 113 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 TRAV4A0A0B4J268 109 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 A4D1N5 150 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 H3BUA1 57 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 LST1O00453 97 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 LGALS3P17931 250 aaKnown RBP4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 COX7A1P24310 79 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 C15orf32Q32M92 178 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 FAM222AQ5U5X8 452 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 Q8N9W7 124 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 EEF1AKMT3Q96AZ1 226 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 TMEM101Q96IK0 257 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 KIR2DL4Q99706 377 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 LITAFQ99732 161 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 ARRDC1-AS1Q9H2J1 176 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 ZNF580Q9UK33 172 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 TP53TG1Q9Y2A0 90 aa4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 ZNF256Q9Y2P7 627 aaPredicted RBP4.07□□□□□ -1.76
AC055874.1-201ENST00000561458 SPTBN2O15020 2390 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 NDUFA4O00483 81 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 CXCL5P42830 114 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 MRPS36P82909 103 aaKnown RBP4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 TTC32Q5I0X7 151 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 RNF182Q8N6D2 247 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 DAND5Q8N907 189 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 C15orf53Q8NAA6 179 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 ZNRF2Q8NHG8 242 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 DNAJC30Q96LL9 226 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 C9orf85Q96MD7 179 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 LINC01587Q99440 93 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 PHLDA3Q9Y5J5 127 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 FREM2Q5SZK8 3169 aa4.06□□□□□ -1.76
AC055874.1-201ENST00000561458 TNRC18O15417 2968 aaPredicted RBP4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 ACACAQ13085 2346 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 PRRC2AP48634 2157 aaKnown RBP4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 IGLV5-45A0A087WSX0 123 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 TRAV2A0A0B4J234 112 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 CRLF1O75462 422 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 MIAQ16674 131 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 C10orf25Q5T742 122 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 VMO1Q7Z5L0 202 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 TMEM61Q8N0U2 210 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 KLHL30-AS1Q8NEE0 82 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 PRORYQ9H606 182 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 YAE1D1Q9NRH1 226 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 BEX4Q9NWD9 120 aaPredicted RBP4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 ICOSQ9Y6W8 199 aa4.05□□□□□ -1.76
AC055874.1-201ENST00000561458 ANKRD11Q6UB99 2663 aaPredicted RBP4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 ZZEF1O43149 2961 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 H7C423 109 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 M0QY20 66 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 COX6CP09669 75 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 FAM159AQ6UWV7 190 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 LRRC75A-AS1Q8N1F1 130 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 C14orf178Q8N769 122 aaPredicted RBP4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 C20orf203Q8NBC4 194 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 SIRPDQ9H106 197 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 PEMTQ9UBM1 199 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 EYSQ5T1H1 3165 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 WDFY3Q8IZQ1 3526 aa4.04□□□□□ -1.76
AC055874.1-201ENST00000561458 IGHV1-58A0A0C4DH39 117 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 TEX49A0A1B0GTD5 131 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 UQCRQO14949 82 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 TRACP01848 142 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 S100A4P26447 101 aaKnown RBP4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 UBE2E1P51965 193 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 DLX1P56177 255 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 HERV-K104P63124 156 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 ZNF415Q09FC8 603 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 DEFB109BQ30KR1 87 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 C11orf71Q6IPW1 123 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 C2orf82Q6UX34 121 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 Q6ZQT7 251 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 TRPT1Q86TN4 253 aaKnown RBP4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 NRGNQ92686 78 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 RPL36ALQ969Q0 106 aaKnown RBP4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 VPREB3Q9UKI3 123 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 S4R3C0 116 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 BDP1A6H8Y1 2624 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 MYO15AQ9UKN7 3530 aa4.03□□□□□ -1.76
AC055874.1-201ENST00000561458 TLN1Q9Y490 2541 aaKnown RBP4.02□□□□□ -1.77
AC055874.1-201ENST00000561458 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
AC055874.1-201ENST00000561458 TINCRA0A1B0GVN0 87 aa4.02□□□□□ -1.77
AC055874.1-201ENST00000561458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms