RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MPDU1O75352 247 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 SLC25A5P05141 298 aaKnown RBP3.32□□□□□ -1.88
HERC1-213ENST00000561359 OR5G3P0C626 314 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 RNASE4P34096 147 aaKnown RBP3.32□□□□□ -1.88
HERC1-213ENST00000561359 VWC2Q2TAL6 325 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 SPINK6Q6UWN8 80 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 Q6ZRG5 221 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 CCDC71LQ8N9Z2 235 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 OR10P1Q8NGE3 313 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 OR10G4Q8NGN3 311 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 GPX8Q8TED1 209 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 GTSF1Q8WW33 167 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 TVP23CQ96ET8 276 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 CTDSP1Q9GZU7 261 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 AAMDCQ9H7C9 122 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 A0A087X0K7 114 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 IGHV3-16A0A0C4DH30 117 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 C3orf85A0A1B0GTC6 90 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 FAM231BA6NCW3 169 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 H3BQ15 152 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 H3BRN7 92 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 H7C1H1 209 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 SCGB1D1O95968 90 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 OR10J4P0C629 311 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 SEC11BP0C7V7 166 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 UBE2MP61081 183 aaKnown RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 PNRC1Q12796 327 aaPredicted RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 SP6Q3SY56 376 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 FAAP20Q6NZ36 180 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 DPPA3Q6W0C5 159 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 SDIM1Q6ZPB5 146 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 LGI3Q8N145 548 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 STPG4Q8N801 248 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 C9orf163Q8N9P6 203 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 TMEM229BQ8NBD8 167 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 C2orf50Q96LR7 162 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 ODF3Q96PU9 254 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 CIB3Q96Q77 187 aaPredicted RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 SHANK2-AS3Q9BTD1 123 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 VAMP8Q9BV40 100 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 EIF5A2Q9GZV4 153 aaKnown RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 GTSF1LQ9H1H1 148 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 C14orf166Q9Y224 244 aaKnown RBP3.31□□□□□ -1.88
HERC1-213ENST00000561359 HIGD1AQ9Y241 93 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 LAMTOR2Q9Y2Q5 125 aa3.31□□□□□ -1.88
HERC1-213ENST00000561359 IGHV1OR15-1A0A075B7D0 117 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 TRAV4A0A0B4J268 109 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 USP17L23D6RBM5 183 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 AGPAT2O15120 278 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 OR7C2O60412 319 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 STAG3L2P0CL84 134 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 PET100P0DJ07 73 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 CTRLP40313 264 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 CAMLGP49069 296 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 PIGPP57054 158 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 DGAT2L7PQ6IED9 249 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 LCN15Q6UWW0 184 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 S100A7AQ86SG5 101 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 NIT1Q86X76 327 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 RNF185Q96GF1 192 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 BTF3L4Q96K17 158 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 SLC50A1Q9BRV3 221 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 TMEM222Q9H0R3 208 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 ZNF331Q9NQX6 463 aaPredicted RBP3.3□□□□□ -1.88
HERC1-213ENST00000561359 UQCR10Q9UDW1 63 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 NAT8Q9UHE5 227 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 KLK12Q9UKR0 248 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 URGCP-MRPS24S4R325 110 aa3.3□□□□□ -1.88
HERC1-213ENST00000561359 ZNF727A8MUV8 499 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 KLLNB2CW77 178 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 H3BTX0 84 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 RHODO00212 210 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 HYPMO75409 117 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 TSPAN13O95857 204 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 TYMSP04818 313 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 GPX1P07203 203 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 PRSS1P07477 247 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
HERC1-213ENST00000561359 CHTF8P0CG12 524 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 ESDP10768 282 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 GATA1P15976 413 aaPredicted RBP3.29□□□□□ -1.88
HERC1-213ENST00000561359 RND3P61587 244 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
HERC1-213ENST00000561359 BATFQ16520 125 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 TMEM182Q6ZP80 229 aaPredicted RBP3.29□□□□□ -1.88
HERC1-213ENST00000561359 Q6ZQT7 251 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 RASL10AQ92737 203 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 SFRP2Q96HF1 295 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 SH3BGRL3Q9H299 93 aa3.29□□□□□ -1.88
HERC1-213ENST00000561359 SLC17A3O00476 420 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 IGLC2P0DOY2 106 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 IGLC3P0DOY3 106 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 AKR1C4P17516 323 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms