RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 H7C1H1 209 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 LY6G6CO95867 125 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 S100A8P05109 93 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 S100PP25815 95 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 CCL18P55774 89 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 HBBP68871 147 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 RPL36AP83881 106 aaKnown RBP7.11□□□□□ -1.27
LRRC28-221ENST00000561276 ATRAIDQ6UW56 229 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 LYPD5Q6UWN5 251 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 SH2D6Q7Z4S9 175 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 ATP5L2Q7Z4Y8 100 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 AMN1Q8IY45 258 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 NEXN-AS1Q8NBZ9 246 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 ATP6V0E2Q8NHE4 81 aa7.11□□□□□ -1.27
LRRC28-221ENST00000561276 RPL36ALQ969Q0 106 aaKnown RBP7.11□□□□□ -1.27
LRRC28-221ENST00000561276 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 FAM104BQ5XKR9 115 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 RASL11AQ6T310 242 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 FRZBQ92765 325 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 TNFRSF18Q9Y5U5 241 aa7.1□□□□□ -1.27
LRRC28-221ENST00000561276 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
LRRC28-221ENST00000561276 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
LRRC28-221ENST00000561276 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
LRRC28-221ENST00000561276 DNAJC30Q96LL9 226 aa7.09□□□□□ -1.27
LRRC28-221ENST00000561276 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
LRRC28-221ENST00000561276 GAS8-AS1O95177 125 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 LINC00694P0DN24 101 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 UBE2D3P61077 147 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 UBE2D2P62837 147 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
LRRC28-221ENST00000561276 MRAP2Q96G30 205 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
LRRC28-221ENST00000561276 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
LRRC28-221ENST00000561276 LCE6AA0A183 80 aa7.07□□□□□ -1.28
LRRC28-221ENST00000561276 ELOBQ15370 118 aa7.07□□□□□ -1.28
LRRC28-221ENST00000561276 Q8N3U1 123 aa7.07□□□□□ -1.28
LRRC28-221ENST00000561276 TGIF2-C20orf24A0A0A6YYL0 155 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 CKS2P33552 79 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 RPS10P46783 165 aaKnown RBP7.06□□□□□ -1.28
LRRC28-221ENST00000561276 OR10J3Q5JRS4 329 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 DAZ4Q86SG3 579 aaKnown RBP7.06□□□□□ -1.28
LRRC28-221ENST00000561276 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-221ENST00000561276 Q9H8V8 135 aa7.06□□□□□ -1.28
LRRC28-221ENST00000561276 DAZ3Q9NR90 486 aaKnown RBP7.06□□□□□ -1.28
LRRC28-221ENST00000561276 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
LRRC28-221ENST00000561276 NCR2O95944 276 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 PPP1R17O96001 155 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 TIRAPP58753 221 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 DEFB104AQ8WTQ1 72 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 UPK3BQ9BT76 320 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
LRRC28-221ENST00000561276 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
LRRC28-221ENST00000561276 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 TRBV24-1A0A075B6N3 115 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 TRBV6-5A0A0K0K1A5 114 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 D6R8Y8 96 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 SIVA1O15304 175 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 PPBPP02775 128 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 COX19Q49B96 90 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 LELP1Q5T871 98 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 NRACQ8N912 160 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
LRRC28-221ENST00000561276 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 TNFRSF6BO95407 300 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 HLA-DQA1P01909 254 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 APCSP02743 223 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
LRRC28-221ENST00000561276 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 YPEL4Q96NS1 127 aa7.03□□□□□ -1.28
LRRC28-221ENST00000561276 IGLV2-18A0A075B6J9 118 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 TMEM238LA0A1B0GVL6 79 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 I3L3M4 83 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 NPYP01303 97 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 PMCHP20382 165 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 SUMO2P61956 95 aaKnown RBP7.02□□□□□ -1.29
LRRC28-221ENST00000561276 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 TMEM97Q5BJF2 176 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 PRELID3AQ96N28 172 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
LRRC28-221ENST00000561276 M0R2N4 97 aa7.01□□□□□ -1.29
LRRC28-221ENST00000561276 VCYO14598 125 aa7.01□□□□□ -1.29
LRRC28-221ENST00000561276 PHOX2AO14813 284 aa7.01□□□□□ -1.29
LRRC28-221ENST00000561276 MT-ND6P03923 174 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms