RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
SNRPA1-210ENST00000560383 WDR73Q6P4I2 378 aa10.17□□□□□ -0.78
SNRPA1-210ENST00000560383 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
SNRPA1-210ENST00000560383 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
SNRPA1-210ENST00000560383 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 SSTP61278 116 aa10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 LYZL1Q6UWQ5 148 aa10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 Q8N3U1 123 aa10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 TPPP3Q9BW30 176 aa10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 RPP21Q9H633 154 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-210ENST00000560383 F5H697 171 aa10.15□□□□□ -0.78
SNRPA1-210ENST00000560383 FAM231DQ6ZW35 169 aa10.15□□□□□ -0.78
SNRPA1-210ENST00000560383 NIT1Q86X76 327 aa10.15□□□□□ -0.78
SNRPA1-210ENST00000560383 M0QY20 66 aa10.14□□□□□ -0.79
SNRPA1-210ENST00000560383 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
SNRPA1-210ENST00000560383 EIF5A2Q9GZV4 153 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-210ENST00000560383 TRBV6-8A0A0A6YYG3 113 aa10.13□□□□□ -0.79
SNRPA1-210ENST00000560383 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
SNRPA1-210ENST00000560383 NTF3P20783 257 aa10.13□□□□□ -0.79
SNRPA1-210ENST00000560383 DAZ4Q86SG3 579 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-210ENST00000560383 DAZ3Q9NR90 486 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-210ENST00000560383 VPS13BQ7Z7G8 4022 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 TEX261Q6UWH6 196 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 GTSF1Q8WW33 167 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 Q9HAA7 133 aa10.12□□□□□ -0.79
SNRPA1-210ENST00000560383 H7C1H1 209 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 CT83Q5H943 113 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 SUMO4Q6EEV6 95 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 LINC01551Q86U37 167 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
SNRPA1-210ENST00000560383 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 PSCAO43653 123 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 GATCO43716 136 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 MGPP08493 103 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 CEBPGP53567 150 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 XGP55808 180 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 TMEM97Q5BJF2 176 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 NTM-AS1Q6ZSK4 140 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 URGCP-MRPS24S4R325 110 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 FAT1Q14517 4588 aa10.1□□□□□ -0.79
SNRPA1-210ENST00000560383 A0A087WX48 190 aa10.09□□□□□ -0.79
SNRPA1-210ENST00000560383 ZNF727A8MUV8 499 aa10.09□□□□□ -0.79
SNRPA1-210ENST00000560383 A8MWL6 223 aa10.09□□□□□ -0.79
SNRPA1-210ENST00000560383 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNRPA1-210ENST00000560383 ELOBQ15370 118 aa10.08□□□□□ -0.8
SNRPA1-210ENST00000560383 TWIST1Q15672 202 aa10.08□□□□□ -0.8
SNRPA1-210ENST00000560383 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
SNRPA1-210ENST00000560383 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
SNRPA1-210ENST00000560383 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
SNRPA1-210ENST00000560383 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 PKIAP61925 76 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 FRZBQ92765 325 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 NIT2Q9NQR4 276 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 KLK12Q9UKR0 248 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 HERC1Q15751 4861 aa10.07□□□□□ -0.8
SNRPA1-210ENST00000560383 C9JQL5 133 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 GCSHP23434 173 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 IQCJQ1A5X6 159 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 KCNIP4Q6PIL6 250 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 GFRA4Q9GZZ7 299 aa10.06□□□□□ -0.8
SNRPA1-210ENST00000560383 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 Q8N814 137 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 RMI2Q96E14 147 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
SNRPA1-210ENST00000560383 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 Q0VG73 95 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 PEA15Q15121 130 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 UBE2WQ96B02 151 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
SNRPA1-210ENST00000560383 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 WFDC2Q14508 124 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 Q5VSD8 79 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 SMIM15Q7Z3B0 74 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 ISOC2Q96AB3 205 aa10.03□□□□□ -0.8
SNRPA1-210ENST00000560383 V9GYV3 84 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 197.1 ms