RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 DKK2Q9UBU2 259 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 POLR3KQ9Y2Y1 108 aaPredicted RBP10.37□□□□□ -0.75
TRAF3-208ENST00000560371 UBE2AP49459 152 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 WFDC11Q8NEX6 87 aa10.37□□□□□ -0.75
TRAF3-208ENST00000560371 MAJINQ3KP22 176 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 PTPRBP23467 1997 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 A6NDX4 124 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 E7EUB6 86 aa10.36□□□□□ -0.75
TRAF3-208ENST00000560371 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
TRAF3-208ENST00000560371 NDUFS6O75380 124 aaKnown RBP10.36□□□□□ -0.75
TRAF3-208ENST00000560371 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 TRAV4A0A0B4J268 109 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 CEND1Q8N111 149 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 TMEM263Q8WUH6 116 aaKnown RBP10.35□□□□□ -0.75
TRAF3-208ENST00000560371 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 NDUFA11Q86Y39 141 aa10.35□□□□□ -0.75
TRAF3-208ENST00000560371 IGLL1P15814 213 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 DLEU1O43261 78 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 BVES-AS1Q5T3Y7 98 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 SPATA25Q9BR10 227 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 MRPL36Q9P0J6 103 aaKnown RBP10.34□□□□□ -0.75
TRAF3-208ENST00000560371 NDUFB1O75438 58 aa10.34□□□□□ -0.75
TRAF3-208ENST00000560371 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
TRAF3-208ENST00000560371 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
TRAF3-208ENST00000560371 PRAC2D3DTV9 90 aa10.33□□□□□ -0.76
TRAF3-208ENST00000560371 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
TRAF3-208ENST00000560371 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
TRAF3-208ENST00000560371 RNF183Q96D59 192 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 FANCD2OSQ96PS1 177 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 ACANP16112 2415 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 IGLC2P0DOY2 106 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 DEFB1P60022 68 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 MSRB1Q9NZV6 116 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
TRAF3-208ENST00000560371 C10orf91Q5T1B1 145 aa10.31□□□□□ -0.76
TRAF3-208ENST00000560371 ZNF747Q9BV97 191 aa10.31□□□□□ -0.76
TRAF3-208ENST00000560371 Q6YL49 198 aa10.31□□□□□ -0.76
TRAF3-208ENST00000560371 FUSP35637 526 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRAF3-208ENST00000560371 NDUFA1O15239 70 aa10.31□□□□□ -0.76
TRAF3-208ENST00000560371 CRYBA4P53673 196 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 UTF1Q5T230 341 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 A0A0J9YX75 114 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 PRSS47A8MTI9 375 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 IFITM1P13164 125 aa10.3□□□□□ -0.76
TRAF3-208ENST00000560371 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 CARD19Q96LW7 228 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 H0Y9J4 135 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 IGLV2-14P01704 120 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
TRAF3-208ENST00000560371 LYPD6Q86Y78 171 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 LYPD6BQ8NI32 183 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 F8W1H4 67 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 C15orf53Q8NAA6 179 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 PPDPFLQ8WWR9 84 aa10.28□□□□□ -0.76
TRAF3-208ENST00000560371 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
TRAF3-208ENST00000560371 A0A0J9YXV3 536 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 SIVA1O15304 175 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 IGKV4-1P06312 121 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 ETDBQ3ZM63 59 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 C22orf34Q6ZV56 151 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 PROP1O75360 226 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.77
TRAF3-208ENST00000560371 LINC01548A6NM66 108 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 K7ERJ3 54 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 CASC2Q6XLA1 102 aa10.27□□□□□ -0.77
TRAF3-208ENST00000560371 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 GAGE12HA6NDE8 117 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 H3BMG7 143 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 ANKRD29Q8N6D5 301 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 MED14OSP0DP75 135 aa10.26□□□□□ -0.77
TRAF3-208ENST00000560371 IGF1P05019 195 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 TRAV26-1A0A087WT03 109 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 A0A1W2PPM0 123 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 MP68P56378 58 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 USP24Q9UPU5 2620 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 ACYP1P07311 99 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms